PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D01478.1.p
Common NameLOC105957187, MIMGU_mgv1a023230mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 335aa    MW: 37894.1 Da    PI: 6.3108
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D01478.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM179.31e-5561321128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       lppGfrFhPtdeel+++yL++kv++ ++++ +++++vd++k+ePwdLp k++ +ekewyfFs+rd+ky+tg r+nrat++gyWk+tgkdke++
  Migut.D01478.1.p   6 LPPGFRFHPTDEELITYYLTNKVSDFEFTT-KAVADVDLNKCEPWDLPGKASLGEKEWYFFSQRDRKYPTGLRTNRATEAGYWKTTGKDKEIF 97 
                       79*************************999.88***************988899*************************************** PP

               NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       + + +lvg+kktLvfy+grapkgekt+Wvmheyrl
  Migut.D01478.1.p  98 RGSVSLVGMKKTLVFYRGRAPKGEKTNWVMHEYRL 132
                       *99999***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.06E-624156IPR003441NAC domain
PROSITE profilePS5100560.5936156IPR003441NAC domain
PfamPF023651.5E-297132IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MEDNILPPGF RFHPTDEELI TYYLTNKVSD FEFTTKAVAD VDLNKCEPWD LPGKASLGEK  60
EWYFFSQRDR KYPTGLRTNR ATEAGYWKTT GKDKEIFRGS VSLVGMKKTL VFYRGRAPKG  120
EKTNWVMHEY RLHNNNLANF NNPTKEEWVV CRVFQKSSTV RKAQQTPSSP PSQDSPCDTN  180
NVYATVNEID DIQNFINNNM MSINNSSSTS NNFMMNYMNT SSDSNPMTNW SGTASTNNSL  240
PSLINWPPLL STNNLSMNAL LLTALQLRSG HHQPRGSDHN YSFMAPQAIN ISQHGNHDFT  300
SMNIDMASTS NELDPVSQPP SLSEQPYNVD SNIW*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-57616217171NO APICAL MERISTEM PROTEIN
1ut4_B2e-57616217171NO APICAL MERISTEM PROTEIN
1ut7_A2e-57616217171NO APICAL MERISTEM PROTEIN
1ut7_B2e-57616217171NO APICAL MERISTEM PROTEIN
3swm_A3e-57616220174NAC domain-containing protein 19
3swm_B3e-57616220174NAC domain-containing protein 19
3swm_C3e-57616220174NAC domain-containing protein 19
3swm_D3e-57616220174NAC domain-containing protein 19
3swp_A3e-57616220174NAC domain-containing protein 19
3swp_B3e-57616220174NAC domain-containing protein 19
3swp_C3e-57616220174NAC domain-containing protein 19
3swp_D3e-57616220174NAC domain-containing protein 19
4dul_A2e-57616217171NAC domain-containing protein 19
4dul_B2e-57616217171NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00364DAPTransfer from AT3G18400Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D01478.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012836565.10.0PREDICTED: protein CUP-SHAPED COTYLEDON 1
TrEMBLA0A022RCT90.0A0A022RCT9_ERYGU; Uncharacterized protein
STRINGMigut.D01478.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15224279
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.14e-94NAC domain containing protein 58