PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D01515.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 192aa    MW: 22982.6 Da    PI: 6.5757
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D01515.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM121.76.8e-38112011128
               NAM  11 deelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelv 100
                       deel+v+yLk+kv++++++  + i+ vd y+++P++L  +   + ++kewyfF+ r+kky++gkr+nr++ +gyWkat  dk+++   +++ +
  Migut.D01515.1.p   1 DEELIVFYLKPKVDEQPVPP-SEINIVDFYQYDPQTLAdEhPSRLGQKEWYFFTFREKKYQNGKRPNRSAGNGYWKATAADKPIHLDqTEQII 92 
                       9****************999.56**************74333444899************************************998566779 PP

               NAM 101 glkktLvfykgrapkgektdWvmheyrl 128
                       g kk Lv+y+g+++ ++ktdW+mhey+l
  Migut.D01515.1.p  93 GYKKNLVYYEGDHKYSRKTDWIMHEYKL 120
                       **************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.06E-431151IPR003441NAC domain
PfamPF023655.5E-201120IPR003441NAC domain
PROSITE profilePS5100543.7231152IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
DEELIVFYLK PKVDEQPVPP SEINIVDFYQ YDPQTLADEH PSRLGQKEWY FFTFREKKYQ  60
NGKRPNRSAG NGYWKATAAD KPIHLDQTEQ IIGYKKNLVY YEGDHKYSRK TDWIMHEYKL  120
PIADPTPKTE KLPEDENDMR LDSWVICRIH KRETKSNKAE LDDNNTHVAL PPPPQEMDEQ  180
RHHQHQQQHH HH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-37115825174Stress-induced transcription factor NAC1
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D01515.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012853254.11e-142PREDICTED: NAC transcription factor NAM-1-like
STRINGMigut.D01515.1.p1e-142(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14648210
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.12e-44NAC domain containing protein 32