PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.D01706.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

TCP

Protein Properties

Length: 302aa MW: 34290 Da PI: 9.854

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.D01706.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	122.5	4.7e-38	121	262	3	135
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.........eaesssssasnss 86 +kkdrhski T++g+RdRR+Rls+e+a++fFdLqd LG+dk+s t+eWLl+ ++ ai +l +s+ + c ++ +s++ Migut.D01706.1.p 121 KKKDRHSKIETARGPRDRRMRLSLEVARKFFDLQDLLGYDKASRTVEWLLRSSNSAIRDLSVDSNRRS--CstlvtvtggA-AATNSNT---- 206 79***********************************************************66666..33244443321.1111111.... PP TCP 87 sg........kaaksaakskksqksaasalnlakesrakarararertrekmriknk 135 + + +++ k+ k++++++ + + +esr kar+rarert++k r++++ Migut.D01706.1.p 207 -TasstmgeeEVVSNSSKKPKPKAKKKIRSTVPRESRRKARERARERTSQKRRLSTE 262 .122234564333333355666666666678999***************999875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03634	7.4E-37	121	257	IPR005333	Transcription factor, TCP
PROSITE profile	PS51369	31.995	122	180	IPR017887	Transcription factor TCP subgroup
PROSITE profile	PS51370	10.059	239	256	IPR017888	CYC/TB1, R domain

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence Send to blast
MYIYLDNFFQ FSTINFNNKM NYNNPTNYSS TTDPFPENDI NSTPPFIFPF PNSPHNMEYE 60 YNYDDLQFLD LFSLHQSQSQ SQSSTIILTN MPENSNNQGQ EIHQQIPNST VATTTTTVKK 120 KKKDRHSKIE TARGPRDRRM RLSLEVARKF FDLQDLLGYD KASRTVEWLL RSSNSAIRDL 180 SVDSNRRSCS TLVTVTGGAA ATNSNTTASS TMGEEEVVSN SSKKPKPKAK KKIRSTVPRE 240 SRRKARERAR ERTSQKRRLS TETTVPLTIA QDLSSVLGNS HQNQQIGEFE LCAWDAYNSS 300 N*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	241	257	RRKARERARERTSQKRR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.D01706.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012853878.1	0.0	PREDICTED: transcription factor CYCLOIDEA-like
TrEMBL	A0A022QAK1	1e-162	A0A022QAK1_ERYGU; Uncharacterized protein (Fragment)
STRING	Migut.D01706.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2482	22	56

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	4e-24	TCP domain protein 12

Link Out ? help Back to Top
Phytozome	Migut.D01706.1.p