PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.D01815.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

Nin-like

Protein Properties

Length: 203aa MW: 23404 Da PI: 8.7746

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.D01815.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	82.5	4.1e-26	38	88	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +++++ e++ +yF++pi++AAkeL+v++T+LK++CR++GI+RWPhRk+ sl Migut.D01815.1.p 38 KSNLTREEVCRYFYMPIAQAAKELNVGVTLLKKRCRELGIRRWPHRKLMSL 88 689*********************************************997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.871	23	108	IPR003035	RWP-RK domain
Pfam	PF02042	1.3E-21	40	88	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 203 aa Download sequence Send to blast
MFAVGRNEMP LPPMVEADNK KADKRSVEKK DVISSNSKSN LTREEVCRYF YMPIAQAAKE 60 LNVGVTLLKK RCRELGIRRW PHRKLMSLQT LIKNVQKMGE EDSVEKGKLM RKAIEILEQE 120 KRIMEEIPDM EMENKTKRLR QACFKANYKK RKLQMGFITD DKITCSESAG PSTSDVYSSG 180 VENYNENGCG TMEEFESFFC YE*

Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription factor. {ECO:0000250}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00234	DAP	Transfer from AT1G74480	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.D01815.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012852961.1	2e-71	PREDICTED: protein RKD2-like
Swissprot	Q9CA66	1e-46	RKD2_ARATH; Protein RKD2
TrEMBL	A0A022QCY5	1e-136	A0A022QCY5_ERYGU; Uncharacterized protein
STRING	Migut.D01815.1.p	1e-148	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4274	21	42

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G74480.1	4e-49	RWP-RK domain-containing protein

Link Out ? help Back to Top
Phytozome	Migut.D01815.1.p

Publications ? help Back to Top
Tedeschi F,Rizzo P,Rutten T,Altschmied L,Bäumlein H RWP-RK domain-containing transcription factors control cell differentiation during female gametophyte development in Arabidopsis. New Phytol., 2017. 213(4): p. 1909-1924 [PMID:27870062]