PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.D01819.1.p

Common Name

LOC105972544, MIMGU_mgv1a024106mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

ZF-HD

Protein Properties

Length: 109aa MW: 12039.5 Da PI: 9.3274

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.D01819.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	88.2	8.3e-28	27	87	2	58
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegt....aaalkCaACgCHRnFHRreve 58 + vrY eC++NhAa + ghavDGC+Ef+++ + a l CaACgCHRnFHRrev+ Migut.D01819.1.p 27 AVVRYVECQRNHAAYIRGHAVDGCREFIAAAVGGKDltnvEAELSCAACGCHRNFHRREVV 87 579***********************9953332244456779************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04770	5.0E-24	29	86	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDom	PD125774	5.0E-17	29	102	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMs	TIGR01566	1.3E-21	30	86	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profile	PS51523	21.9	31	85	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0048509	Biological Process	regulation of meristem development

Sequence ? help Back to Top
Protein Sequence Length: 109 aa Download sequence Send to blast
MKKRQEVMIT KKGSHNNNKR SARKSQAVVR YVECQRNHAA YIRGHAVDGC REFIAAAVGG 60 KDLTNVEAEL SCAACGCHRN FHRREVVEIT SEVVPDSYSS PSNNSTLY*

Functional Description ? help Back to Top
Source	Description
UniProt	Inhibits zinc finger homeodomain (ZHD) transcription factors by interacting with them to prevent both their nuclear localization and their DNA-binding properties. Involved in integrating signals from multiple hormones by regulating the expression of specific genes. Promotes the formation of ectopic shoot meristems on leaf margins. {ECO:0000269\|PubMed:21455630}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.D01819.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012852957.1	1e-75	PREDICTED: mini zinc finger protein 3
Swissprot	Q2Q493	4e-23	MIF3_ARATH; Mini zinc finger protein 3
TrEMBL	A0A022Q9T8	3e-74	A0A022Q9T8_ERYGU; Uncharacterized protein
STRING	Migut.D01819.1.p	4e-75	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1105	24	86

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18835.1	2e-25	mini zinc finger

Link Out ? help Back to Top
Phytozome	Migut.D01819.1.p
Entrez Gene	105972544