PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D02160.1.p
Common NameLOC105949048, MIMGU_mgv1a022343mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WOX
Protein Properties Length: 230aa    MW: 26012.2 Da    PI: 9.4515
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D02160.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.91.7e-181069357
                      --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                      +R+++t+eq+ +L el+++  ++p+ ++++++A +l    +++ ++V++WFqN++a+e++
  Migut.D02160.1.p 10 RRWCPTAEQVMILDELYRRgLKTPNSAQIQRIAGHLsfygKVQGKNVFYWFQNHKARERQ 69
                      8*****************99**************************************97 PP
2Wus_type_Homeobox111.35.1e-36970364
  Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                       + RW+Pt+eQ++iL+ely++Gl+tPn+++iqri+ +L+ yGk+++kNVfyWFQN+kaRerqk
   Migut.D02160.1.p  9 SRRWCPTAEQVMILDELYRRGLKTPNSAQIQRIAGHLSFYGKVQGKNVFYWFQNHKARERQK 70
                       78***********************************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007110.074570IPR001356Homeobox domain
SuperFamilySSF466895.99E-11672IPR009057Homeodomain-like
SMARTSM003896.6E-4774IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.605.5E-71069IPR009057Homeodomain-like
PfamPF000464.7E-161069IPR001356Homeobox domain
CDDcd000861.29E-41070No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008283Biological Processcell proliferation
GO:0009908Biological Processflower development
GO:0009943Biological Processadaxial/abaxial axis specification
GO:0009947Biological Processcentrolateral axis specification
GO:0010865Biological Processstipule development
GO:0048513Biological Processanimal organ development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MCPASSAVSR RWCPTAEQVM ILDELYRRGL KTPNSAQIQR IAGHLSFYGK VQGKNVFYWF  60
QNHKARERQK LRKKFANLLL HHQHHHDPHT RFLDPQTRFL QPPPFHQLLS HGCSDPPNLL  120
IPQHAEGGTA INISEEAPHG GGGVVVTPSS WMSCSWRRWR DNNNNNNNNY NNDIPTYGHD  180
SAMITGVGPT YYPCFFRDDK PLQTLQLFPL SSSPPRATTT TTTTASINE*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D02160.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012827770.11e-174PREDICTED: WUSCHEL-related homeobox 3-like
TrEMBLA0A022PTP31e-172A0A022PTP3_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29591951
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28610.16e-35WOX family protein