PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.D02503.2.p

Common Name

LOC105955981, MIMGU_mgv1a013479mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

ERF

Protein Properties

Length: 218aa MW: 24843 Da PI: 9.4532

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.D02503.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	34.6	4.9e-11	111	152	3	51
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 +GV+++ +W A I++ +k+++lg+ g+ eeAa+++++a+ Migut.D02503.2.p 111 MRGVYFKN--LKWQAAIKVE-----KKQIHLGTVGSQEEAARLYDRAAF 152 79*966..5****6.....6******************985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF54171	1.05E-7	110	155	IPR016177	DNA-binding domain
Pfam	PF00847	7.3E-5	110	153	IPR001471	AP2/ERF domain
SMART	SM00380	1.1E-4	110	167	IPR001471	AP2/ERF domain
Gene3D	G3DSA:3.30.730.10	3.5E-6	117	157	IPR001471	AP2/ERF domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence Send to blast
MVSIRKRRLL AMCSGQNSAT APLPRGDFEQ GNAPAPDNCA ENKRPVTIHP LPLNNDIYSP 60 KEETMMEAGS GSSNVSASSP SKEYQIQHFP EVKRRKRHRR KHVENQEPCI MRGVYFKNLK 120 WQAAIKVEKK QIHLGTVGSQ EEAARLYDRA AFMCGREPNF ELSEEEKNEL RKFKWEEFLA 180 ITRSAITNKK SQRRSGTGAR RKVEDDDDWE SDEILAP*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.D02503.2.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012835245.1	1e-163	PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X2
TrEMBL	A0A022RJY4	1e-161	A0A022RJY4_ERYGU; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13040.1	6e-48	ERF family protein

Link Out ? help Back to Top
Phytozome	Migut.D02503.2.p
Entrez Gene	105955981