PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E00009.1.p
Common NameMIMGU_mgv1a000863mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family CAMTA
Protein Properties Length: 942aa    MW: 105998 Da    PI: 5.3795
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E00009.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-11651.3e-51131264116
              CG-1   4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 
                       e ++rwlk+ e+  iL+n+e+h+lt++ +++p sgsl L+n++++++frkDG+sw+++kd kt  E+he+LKvg+ve+l+cyYah+eenp+fq
  Migut.E00009.1.p  13 EaQSRWLKPVEVFFILKNYEEHQLTHQIPQKPASGSLYLFNKRVLKFFRKDGHSWRRRKDQKTFAEAHERLKVGNVEALNCYYAHGEENPSFQ 105
                       4489***************************************************************************************** PP

              CG-1  96 rrcywlLeeelekivlvhyle 116
                       rr+yw+L++e+e+ivlvhy++
  Migut.E00009.1.p 106 RRSYWILDREYEHIVLVHYRD 126
                       *******************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143772.1127133IPR005559CG-1 DNA-binding domain
SMARTSM010769.1E-6710128IPR005559CG-1 DNA-binding domain
PfamPF038591.0E-4513126IPR005559CG-1 DNA-binding domain
SuperFamilySSF812961.27E-17373457IPR014756Immunoglobulin E-set
CDDcd001020.00107373457No hitNo description
PfamPF018331.5E-9373456IPR002909IPT domain
Gene3DG3DSA:2.60.40.102.9E-8373461IPR013783Immunoglobulin-like fold
SuperFamilySSF484031.87E-16551660IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.201.1E-15553658IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029715.645566658IPR020683Ankyrin repeat-containing domain
CDDcd002041.34E-13571658No hitNo description
PfamPF127965.0E-7583659IPR020683Ankyrin repeat-containing domain
SMARTSM002480.0012599628IPR002110Ankyrin repeat
PROSITE profilePS5008811.033599631IPR002110Ankyrin repeat
SMARTSM000157716738IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.693717746IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525402.39E-8768824IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000152.2776798IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.004777806IPR000048IQ motif, EF-hand binding site
PfamPF006120.02779797IPR000048IQ motif, EF-hand binding site
SMARTSM000155.0E-4799821IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.901800825IPR000048IQ motif, EF-hand binding site
PfamPF006123.6E-5802821IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 942 aa     Download sequence    Send to blast
MQSGYDINYL AGEAQSRWLK PVEVFFILKN YEEHQLTHQI PQKPASGSLY LFNKRVLKFF  60
RKDGHSWRRR KDQKTFAEAH ERLKVGNVEA LNCYYAHGEE NPSFQRRSYW ILDREYEHIV  120
LVHYRDINER RQSAGSTSQF STSPSTFSPN PNSFASDRPD SSFVISESIG MYHNESSPSS  180
VEISSSQVIK NIGMSQLDLE ERTDDVSSSS VPTLSQALRR IEEQLSLNDD EVKEIDRIYI  240
ENEDSNDLED MLRDYEFSGQ TLLNGPQDLL SQKPDDQVRQ HQQLSVADVD IWQEMLDGSK  300
TLLNDDSQTQ SERHDASSLI FQEVDSLKFD AYSPLSNAYG TTADYTSLFD QDGLGISPEN  360
NISLTVAQKQ KFTIREISPE WCYTSDGAKI IIVGSFFSDP SECAWACMIG DTEVPVEIIQ  420
EGVLRCNAPL HLQGKVNICI TSGNRESCSE VREFEYRAKP NLCTHSNQPE TETNKSSEEL  480
LLLVRFVQML LSDLLPKEDD YESRIDSFGK SRVAEEDSWN QIIDALLVGT STSSSTLDWL  540
LQELLKDKME VWLSSKLQKN NHLSKKEQGI IHMVAGLGFE WALQPIVNAG VSINFRDING  600
WTALHWAARF GREKMVAALM ASGASAGAVT DPNTQDPIGK TPASIAATCG HKGLAGYLSE  660
VSLISHLSSL TLEESELSKG SAALEAERTI NSLSRESSSA NEDEDSLRHT LDAVRNATQA  720
AARIQSAFRA HSFRKRQQTE VAVAMAGAYG DDYALLANDI HGLSAASKLA FRNAREYNSA  780
ALSIQKKYRG WKGRKDFLSL RQKVVKIQAH VRGYQVRKNY KVCWAVGILE KVVLRWRRRG  840
VGLRGFRHDS ESIDESEDED ILKVFRKQKV DKAIDEAVAR VLSMVESTEA RQQYHRILQK  900
YRQAKAELVT AESDTASSSR LDISSDQGIT SMENDQIYHS I*
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved together with CAMTA2 and CAMTA3 in the positive regulation of a general stress response (PubMed:25039701). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:25039701, ECO:0000305|PubMed:11925432}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E00009.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By heat shock, UVB, salt, wounding, ethylene, methyl jasmonate, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by cold stress (PubMed:28351986). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:28351986}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831652.10.0PREDICTED: calmodulin-binding transcription activator 4
SwissprotQ9FYG20.0CMTA4_ARATH; Calmodulin-binding transcription activator 4
TrEMBLA0A022RQP30.0A0A022RQP3_ERYGU; Uncharacterized protein
STRINGMigut.E00009.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA39322037
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.11e-168Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
Publications ? help Back to Top
  1. Benn G, et al.
    A key general stress response motif is regulated non-uniformly by CAMTA transcription factors.
    Plant J., 2014. 80(1): p. 82-92
    [PMID:25039701]
  2. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]