PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E00075.1.p
Common NameMIMGU_mgv1a023670mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB
Protein Properties Length: 309aa    MW: 34181.7 Da    PI: 6.7755
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E00075.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.64.3e-161865148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+W++ Ed++l+ +++++G g+W++ +++ g++R++k+c++rw +yl
  Migut.E00075.1.p 18 KGPWSPLEDQKLLSYIHLHGHGSWASLPSKAGLKRCGKSCRLRWTNYL 65
                      79********************************************97 PP
2Myb_DNA-binding47.44.3e-1571115147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rg++  +E++ +++++++ G++ W++Ia++++ +Rt++++k++w++ 
  Migut.E00075.1.p  71 RGKFNLQEEDTIIQLHALVGNR-WSAIAAHLP-KRTGNEIKNHWNTN 115
                       899*******************.*********.***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129415.0041365IPR017930Myb domain
SuperFamilySSF466895.31E-2717112IPR009057Homeodomain-like
SMARTSM007172.3E-131767IPR001005SANT/Myb domain
PfamPF002491.9E-151865IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.3E-221972IPR009057Homeodomain-like
CDDcd001678.80E-102065No hitNo description
PROSITE profilePS5129424.34566120IPR017930Myb domain
SMARTSM007173.8E-1570118IPR001005SANT/Myb domain
PfamPF002492.2E-1471116IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.4E-2473121IPR009057Homeodomain-like
CDDcd001673.73E-1073116No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MENERYEGRR CNNVVLKKGP WSPLEDQKLL SYIHLHGHGS WASLPSKAGL KRCGKSCRLR  60
WTNYLRPDIK RGKFNLQEED TIIQLHALVG NRWSAIAAHL PKRTGNEIKN HWNTNLKKKM  120
IKMGLDPVTH MPINHRLGCA QPKDFANLCH MAQWESARLE AEARLVRRQF TALPPPPPPP  180
PCFDVLNAWE CETTGGTLNC FFAGGSSLQS PAPFPAFGEE LAVEDVDDGG GAKGIMDISE  240
ELYGDGVTPG VVDDSLGFPR FTPADDGNAV VGGWWGSVAR EDDVAADYWG SSLDDVAFSN  300
RDLRKLFC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A4e-24161205108B-MYB
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtFunctions as a repressor of epidermal cell outgrowth and negatively regulate trichome branch formation (PubMed:18805951, PubMed:21070410). Acts as both a positive and negative regulator of cellular outgrowth. Promotes both trichome expansion and branch formation (PubMed:21070410). Coordinately with WIN1/SHN1, participates in the regulation of cuticle biosynthesis and wax accumulation in reproductive organs and trichomes. Functions in cuticle nanoridge formation in petals and stamens, and in morphogenesis of petal conical cells and trichomes (PubMed:23709630). May play a role in the regulation of cuticle formation in vegetative organs (PubMed:24169067). {ECO:0000269|PubMed:18805951, ECO:0000269|PubMed:21070410, ECO:0000269|PubMed:23709630, ECO:0000269|PubMed:24169067}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E00075.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ2022780.0HQ202278.1 Mimulus guttatus pop-variant IM62 MYB transcription factor MIXTA-like 6 protein (MYBML6) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012855394.10.0PREDICTED: myb-related protein Hv1-like, partial
SwissprotQ9LE637e-81MY106_ARATH; Transcription factor MYB106
TrEMBLA0A022Q7B10.0A0A022Q7B1_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01140.12e-75myb domain protein 106