PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E00095.1.p
Common NameMIMGU_mgv1a022481mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 381aa    MW: 42972 Da    PI: 6.4331
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E00095.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.73.9e-52151441128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                       + pGfrFhPtdeelv +yLk+kv++k+l++ e ik++diyk++PwdLp + ++++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d+++
  Migut.E00095.1.p  15 MLPGFRFHPTDEELVGFYLKRKVQHKPLSI-ELIKQLDIYKHDPWDLPtELATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPI 106
                       579***************************.89***************556667899************************************ PP

               NAM  93 lsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +++  +++ +glkk+Lvfykgra kg ktdW+mhe+rl
  Migut.E00095.1.p 107 YASdgGSKCIGLKKSLVFYKGRAAKGIKTDWMMHEFRL 144
                       **9777777***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.79E-5614176IPR003441NAC domain
PROSITE profilePS5100556.3815176IPR003441NAC domain
PfamPF023651.4E-2517144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    Send to blast
MDHARIESEK TEEIMLPGFR FHPTDEELVG FYLKRKVQHK PLSIELIKQL DIYKHDPWDL  60
PTELATTGEK EWYFYCPRDR KYRNSARPNR VTGAGFWKAT GTDRPIYASD GGSKCIGLKK  120
SLVFYKGRAA KGIKTDWMMH EFRLPSLNDS VSPSKKYLDK NIPANEAWAI CRIFKKSSSS  180
NSQRANMSQH SWVSPVFDHI ITTCDANNAI SPCDFNNANY HSGYYSSKTN YSSPLQFGSP  240
AVYQIENTPH QFTTSLPAGI NNNNNDASSL FLEMSSSIFG EFVNNEHCNN GIFSSDTETG  300
NLVQENVCAV VGKDEIIDVG QRLLDEDQLG LIRSMGFDYP NHNYGLPMSF TDAWKSNLVW  360
DSSPCPSELS TSYSTNNCYI *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A7e-521118113170NO APICAL MERISTEM PROTEIN
1ut4_B7e-521118113170NO APICAL MERISTEM PROTEIN
1ut7_A7e-521118113170NO APICAL MERISTEM PROTEIN
1ut7_B7e-521118113170NO APICAL MERISTEM PROTEIN
4dul_A7e-521118113170NAC domain-containing protein 19
4dul_B7e-521118113170NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E00095.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011071000.11e-150putative NAC domain-containing protein 94
TrEMBLA0A022Q7D40.0A0A022Q7D4_ERYGU; Uncharacterized protein
STRINGMigut.E00095.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22022262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26870.14e-94NAC family protein