PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E00229.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ARR-B
Protein Properties Length: 543aa    MW: 62024.8 Da    PI: 5.9848
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E00229.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like76.92.6e-24285338155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       k+r++Wt +LH++Fv+av+q+ G ek  Pk+il+lm+v+ Lt+e+v+SHLQkYRl
  Migut.E00229.1.p 285 KARVVWTVDLHQKFVRAVNQI-GFEKVGPKKILDLMGVPWLTRENVASHLQKYRL 338
                       68*******************.9*******************************8 PP
2Response_reg80.17.3e-271022121109
                       EEEESSSHHHHHHHHHHHHHTTCE.EEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegye.evaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedaleal 90 
                       vl+vdD+p+ +++l+++l+k +ye +v+++  ++eal++l+e++  +D+++ D++mp+mdG++ll++   e  +lp+i+++  ge + + + +
  Migut.E00229.1.p 102 VLVVDDDPTWLKILEKMLKKCNYEvSVTTCNLAREALNILRERKdgFDIVISDVNMPDMDGFRLLEHVGLEM-DLPVIMMSVDGETSRVMKGV 193
                       89*****************77773156688889*******999999**********************6644.8******************* PP

                       HTTESEEEESS--HHHHHH CS
      Response_reg  91 kaGakdflsKpfdpeelvk 109
                       + Ga d+l Kp+ ++el++
  Migut.E00229.1.p 194 QHGACDYLLKPIRMKELRN 212
                       ****************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23006.1E-4399225No hitNo description
SuperFamilySSF521723.56E-3499225IPR011006CheY-like superfamily
SMARTSM004489.2E-32100214IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011042.966101218IPR001789Signal transduction response regulator, receiver domain
PfamPF000724.0E-24102213IPR001789Signal transduction response regulator, receiver domain
CDDcd001568.21E-29103218No hitNo description
SuperFamilySSF466893.23E-17283342IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.608.0E-28283343IPR009057Homeodomain-like
TIGRFAMsTIGR015571.4E-21285338IPR006447Myb domain, plants
PfamPF002498.3E-8287337IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009735Biological Processresponse to cytokinin
GO:0010082Biological Processregulation of root meristem growth
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    Send to blast
MTVWCPHRPL TPSYIAGAKY SFILSLDLFP LKNPLSLSLF LSSTLFLSLV HTVCSIIYIY  60
EPYTYIIVCR CLFSFRLITN LMMESSGFSS PRTECFPAGL RVLVVDDDPT WLKILEKMLK  120
KCNYEVSVTT CNLAREALNI LRERKDGFDI VISDVNMPDM DGFRLLEHVG LEMDLPVIMM  180
SVDGETSRVM KGVQHGACDY LLKPIRMKEL RNIWQHVFRK RIHEVRDIEG YESIDEINNM  240
MRCGTEQFED GFLFSGDFIT GKKRKDVDSK YDDRVCGESS SSAKKARVVW TVDLHQKFVR  300
AVNQIGFEKV GPKKILDLMG VPWLTRENVA SHLQKYRLYL SRLQKENELK STFGATKELD  360
IFSKDHSISA HQIIQANETY ADKICDKNDL AKTSASIRND FYPDVKSEPK IQVHYSWNSE  420
APPLELIKKD GNNKTVHFHS EYTFDKRAQT GPTPWNTSGP HSFDVLETPS TAEAAIRLWD  480
EEFNDYSPQG DFYPPINAYI GYDNQELIDG VPPHLYDSLK FDSSVGPGES VEYHVIDQGL  540
FA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A6e-18281343163ARR10-B
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00010PBMTransfer from AT1G67710Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E00229.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012855342.10.0PREDICTED: two-component response regulator ARR11-like isoform X1
TrEMBLA0A022Q3L90.0A0A022Q3L9_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA67882433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67710.11e-120response regulator 11