PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E00229.2.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ARR-B
Protein Properties Length: 541aa    MW: 61838.6 Da    PI: 5.9848
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E00229.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like76.92.6e-24283336155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       k+r++Wt +LH++Fv+av+q+ G ek  Pk+il+lm+v+ Lt+e+v+SHLQkYRl
  Migut.E00229.2.p 283 KARVVWTVDLHQKFVRAVNQI-GFEKVGPKKILDLMGVPWLTRENVASHLQKYRL 336
                       68*******************.9*******************************8 PP
2Response_reg83.66e-281022101109
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                       vl+vdD+p+ +++l+++l+k +y ev+++  ++eal++l+e++  +D+++ D++mp+mdG++ll++   e  +lp+i+++  ge + + + ++
  Migut.E00229.2.p 102 VLVVDDDPTWLKILEKMLKKCNY-EVTTCNLAREALNILRERKdgFDIVISDVNMPDMDGFRLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQ 192
                       89*********************.***************999999**********************6644.8******************** PP

                       TTESEEEESS--HHHHHH CS
      Response_reg  92 aGakdflsKpfdpeelvk 109
                        Ga d+l Kp+ ++el++
  Migut.E00229.2.p 193 HGACDYLLKPIRMKELRN 210
                       ***************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23003.0E-4499223No hitNo description
SuperFamilySSF521722.56E-3699223IPR011006CheY-like superfamily
SMARTSM004481.9E-32100212IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011043.462101216IPR001789Signal transduction response regulator, receiver domain
PfamPF000725.6E-25102211IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.26E-30103216No hitNo description
Gene3DG3DSA:1.10.10.608.0E-28281341IPR009057Homeodomain-like
SuperFamilySSF466893.23E-17281340IPR009057Homeodomain-like
TIGRFAMsTIGR015571.4E-21283336IPR006447Myb domain, plants
PfamPF002498.2E-8285335IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009735Biological Processresponse to cytokinin
GO:0010082Biological Processregulation of root meristem growth
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 541 aa     Download sequence    Send to blast
MTVWCPHRPL TPSYIAGAKY SFILSLDLFP LKNPLSLSLF LSSTLFLSLV HTVCSIIYIY  60
EPYTYIIVCR CLFSFRLITN LMMESSGFSS PRTECFPAGL RVLVVDDDPT WLKILEKMLK  120
KCNYEVTTCN LAREALNILR ERKDGFDIVI SDVNMPDMDG FRLLEHVGLE MDLPVIMMSV  180
DGETSRVMKG VQHGACDYLL KPIRMKELRN IWQHVFRKRI HEVRDIEGYE SIDEINNMMR  240
CGTEQFEDGF LFSGDFITGK KRKDVDSKYD DRVCGESSSS AKKARVVWTV DLHQKFVRAV  300
NQIGFEKVGP KKILDLMGVP WLTRENVASH LQKYRLYLSR LQKENELKST FGATKELDIF  360
SKDHSISAHQ IIQANETYAD KICDKNDLAK TSASIRNDFY PDVKSEPKIQ VHYSWNSEAP  420
PLELIKKDGN NKTVHFHSEY TFDKRAQTGP TPWNTSGPHS FDVLETPSTA EAAIRLWDEE  480
FNDYSPQGDF YPPINAYIGY DNQELIDGVP PHLYDSLKFD SSVGPGESVE YHVIDQGLFA  540
*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A6e-18279341163ARR10-B
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00010PBMTransfer from AT1G67710Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E00229.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012855343.10.0PREDICTED: two-component response regulator ARR11-like isoform X2
TrEMBLA0A022Q1S70.0A0A022Q1S7_ERYGU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67710.11e-122response regulator 11