PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E00296.1.p
Common NameLOC105974789, MIMGU_mgv1a012168mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 260aa    MW: 28847.1 Da    PI: 4.9446
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E00296.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.51.4e-1458104354
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       ++h+e+ErrRR+riN+ +++Lr+llP+      +K +Ka+ L ++++++k+L
  Migut.E00296.1.p  58 KSHSEAERRRRERINNHLAKLRSLLPST-----TKTDKASLLAEVIQHVKEL 104
                       79*************************9.....8****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.90755104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.07E-458107No hitNo description
PfamPF000105.4E-1258104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.1E-1559113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.97E-1559113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.3E-1361110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2601.7E-5143192No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    Send to blast
MEGGSPGDHS HQLRMISEVV QYPNNSSCGG AAPFGLHAEL QKMTAQEIMD AKAIAASKSH  60
SEAERRRRER INNHLAKLRS LLPSTTKTDK ASLLAEVIQH VKELKRQTSL IEETSPVPTE  120
TDELTVDNAS DAGEDGKWIV KASICCEDRP ELLPELIKAL KSMRLRTLRA EITTLGGRVK  180
NVLYITAEEE EFSNYDNNDD NDDVAEENIR EERDYSIRSI EEALRAVMEK SSSNGDESGS  240
AGSVKRQRVN TSVLEYRSF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16368ERRRRE
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E00296.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012855397.10.0PREDICTED: transcription factor bHLH30-like
SwissprotQ9S7Y16e-86BH030_ARATH; Transcription factor bHLH30
TrEMBLA0A022Q7V90.0A0A022Q7V9_ERYGU; Uncharacterized protein
STRINGMigut.E00296.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40832444
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.12e-80bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Ohashi-Ito K, et al.
    A bHLH complex activates vascular cell division via cytokinin action in root apical meristem.
    Curr. Biol., 2014. 24(17): p. 2053-8
    [PMID:25131670]
  3. Katayama H, et al.
    A Negative Feedback Loop Controlling bHLH Complexes Is Involved in Vascular Cell Division and Differentiation in the Root Apical Meristem.
    Curr. Biol., 2015. 25(23): p. 3144-50
    [PMID:26616019]