PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E00337.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 193aa    MW: 21629.2 Da    PI: 6.6885
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E00337.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP233.31.2e-1069113452
               AP2   4 kGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkk 52 
                        GVr++k  g+++A I d ++    +kr++lg+f tae A  a+   +++
  Migut.E00337.1.p  69 AGVRRRK-FGKFAAVINDpFK----KKRVWLGTFNTAEAASVAYLSKKRE 113
                       59**999.9*********662....5**********99999998776665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103214.22367125IPR001471AP2/ERF domain
SuperFamilySSF541711.7E-1268114IPR016177DNA-binding domain
PRINTSPR003677.6E-66879IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.7E-1569113IPR001471AP2/ERF domain
PfamPF008473.9E-669103IPR001471AP2/ERF domain
SMARTSM003808.1E-770131IPR001471AP2/ERF domain
CDDcd000183.55E-1470107No hitNo description
PRINTSPR003677.6E-690106IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MKFRVTYPDP DATDSSSDEI ESTQIKSKTK AHEFIVDKAK FLHKIANFSG ENPMGSVSSN  60
KLTGKSSLAG VRRRKFGKFA AVINDPFKKK RVWLGTFNTA EAASVAYLSK KREFDQKLLT  120
HRRFDWVHEN ETSDEIGGAA AVEEEVSSGN QPDEEFGFFN GVQVFDRYGY LVGEFSKIDD  180
LRIHIDENGV FC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17290RRKFGKFAAVINDPFKKKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E00337.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012846035.11e-140PREDICTED: ethylene-responsive transcription factor ERF117-like
TrEMBLA0A022QU021e-121A0A022QU02_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA50751534
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49120.16e-16ERF family protein