PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E00430.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HD-ZIP
Protein Properties Length: 221aa    MW: 25010.3 Da    PI: 8.0755
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E00430.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.62.2e-1873128256
                       T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox   2 rkRttftkeqleeLeelFek.nrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                       rk+ ++tkeq + Lee F++ n++++ +++e LA+kl+L+ rqV vWFqNrRa+ k
  Migut.E00430.1.p  73 RKKLRLTKEQSRLLEESFRQqNHTLNPKQKEILAQKLHLKARQVEVWFQNRRARSK 128
                       78889**************98*********************************98 PP
2HD-ZIP_I/II107.87.7e-3573162190
       HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeee.kLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                       +kk+rl+keq++lLEesF++++ +L+p++K+ la++L+l++rqv+vWFqnrRAR k+kq+E+++e+Lkr++ +l+e+n++L+ eveeLr +
  Migut.E00430.1.p  73 RKKLRLTKEQSRLLEESFRQQNhTLNPKQKEILAQKLHLKARQVEVWFQNRRARSKLKQTEMECEYLKRWFVSLTEQNKKLQIEVEELR-S 162
                       69****************99998*****************************************************************9.4 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.607.3E-1748131IPR009057Homeodomain-like
SuperFamilySSF466892.01E-1663131IPR009057Homeodomain-like
PROSITE profilePS5007116.87669130IPR001356Homeobox domain
SMARTSM003891.3E-1471134IPR001356Homeobox domain
CDDcd000864.87E-1472131No hitNo description
PfamPF000469.2E-1673128IPR001356Homeobox domain
PROSITE patternPS000270105128IPR017970Homeobox, conserved site
PfamPF021837.9E-9130164IPR003106Leucine zipper, homeobox-associated
SMARTSM003407.7E-16130173IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    Send to blast
MENFPNNSSS CLDLTIAMPG FSSSPSSLPS SGESGGGRMK VVDVNLVPSS EREEECMEEE  60
EEDESPNKGP APRKKLRLTK EQSRLLEESF RQQNHTLNPK QKEILAQKLH LKARQVEVWF  120
QNRRARSKLK QTEMECEYLK RWFVSLTEQN KKLQIEVEEL RSLKAGHHPD CRHLPPPPST  180
LTMCPHCQRV TTTAATNNHL DTATKMLALQ SRQPSAACFN *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1122130RRARSKLKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E00430.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012846045.11e-162PREDICTED: homeobox-leucine zipper protein ATHB-17
SwissprotQ8S9N62e-66ATB17_ARATH; Homeobox-leucine zipper protein ATHB-17
TrEMBLA0A2G9HFF84e-83A0A2G9HFF8_9LAMI; Transcription factor HEX
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29024186
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01430.15e-55homeobox-leucine zipper protein 17
Publications ? help Back to Top
  1. Zhao P, et al.
    ATHB17 enhances stress tolerance by coordinating photosynthesis associated nuclear gene and ATSIG5 expression in response to abiotic stress.
    Sci Rep, 2017. 7: p. 45492
    [PMID:28358040]