PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E00465.1.p
Common NameLOC105966183, MIMGU_mgv1a005805mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 471aa    MW: 51895.4 Da    PI: 6.3724
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E00465.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.00034127149123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       ++Cp Cg+ F++ ++   H  ++
  Migut.E00465.1.p 127 FECPVCGRGFTSEEEVSIHVESC 149
                       89*************99998776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.10.20.902.3E-82652No hitNo description
PROSITE profilePS5015710.201127158IPR007087Zinc finger, C2H2
CDDcd092121.88E-18170257No hitNo description
SuperFamilySSF1435039.68E-17178264IPR018997PUB domain
SMARTSM005805.3E-11181245IPR018997PUB domain
PfamPF094098.9E-13182253IPR018997PUB domain
SuperFamilySSF542363.36E-12329437IPR029071Ubiquitin-related domain
Gene3DG3DSA:3.10.20.902.3E-8341435No hitNo description
PROSITE profilePS5003310.293353437IPR001012UBX domain
PfamPF007892.7E-5353403IPR001012UBX domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0050832Biological Processdefense response to fungus
GO:0005515Molecular Functionprotein binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 471 aa     Download sequence    Send to blast
MDEVKDKMKG LMKKVNNPFT SSLSGKFKGQ GRVLGSSSPS QPPLPSSSSS SSSSSSSNSK  60
PSPQKPIATI SERKPETKKR AETITETETQ SKPNANAQPK SETGFDPFDS LITSGKRNPN  120
GYSLQVFECP VCGRGFTSEE EVSIHVESCL SIESGSKESD GNVNQLQTCV SAYLSEKPSD  180
GSMEVVIRVL RNMVKEPENS KFRKIRLGNP KIKEAIGDVV GAVDLLECIG LELKEEGGEM  240
WLVMDDFSEE RLRLVKDGLL LLEPKKKKVE ELPSISPAKL EEPIKPKEVD RQIQVFFSVS  300
ESVAAKIEVP DSFYNLSAEE LKRESDARKK KFEDSKLLIP KSYREKQAKA AKKRYKKTLI  360
RIQFPDGVVL QAIFLPSELT GALYEFVSNA LKDPSLEFQL LHPVLIKRRI IPHSPAPGEK  420
AITLEEEDLV PAALIKFRPI ETDDVVFTGL CNELLEISEP LVSTSAVPPS *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5ifs_A8e-1530443719146Tether containing UBX domain for GLUT4
5ifs_C8e-1530443719146Tether containing UBX domain for GLUT4
5ifw_A3e-1530443719146Tether containing UBX domain for GLUT4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtFacilitates the interaction of SYP31 and CDC48A, thereby regulating an CDC48A membrane-associated function (Ref.8). Appears to act as a negative regulator mediating the powdery mildew-plant interaction (PubMed:19176722, PubMed:23301616). {ECO:0000269|PubMed:19176722, ECO:0000269|PubMed:23301616, ECO:0000269|Ref.8}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E00465.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced in response to powdery mildew and by benzothiadiazole (BTH) treatment. {ECO:0000269|PubMed:19176722}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012846203.10.0PREDICTED: plant UBX domain-containing protein 2
SwissprotQ9ZU931e-175PUX2_ARATH; Plant UBX domain-containing protein 2
TrEMBLA0A022QRA00.0A0A022QRA0_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1011266
Publications ? help Back to Top
  1. Suzuki T,Park H,Till EA,Lennarz WJ
    The PUB domain: a putative protein-protein interaction domain implicated in the ubiquitin-proteasome pathway.
    Biochem. Biophys. Res. Commun., 2001. 287(5): p. 1083-7
    [PMID:11587532]
  2. Rancour DM,Park S,Knight SD,Bednarek SY
    Plant UBX domain-containing protein 1, PUX1, regulates the oligomeric structure and activity of arabidopsis CDC48.
    J. Biol. Chem., 2004. 279(52): p. 54264-74
    [PMID:15498773]
  3. Chandran D,Rickert J,Cherk C,Dotson BR,Wildermuth MC
    Host cell ploidy underlying the fungal feeding site is a determinant of powdery mildew growth and reproduction.
    Mol. Plant Microbe Interact., 2013. 26(5): p. 537-45
    [PMID:23301616]