PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E00626.1.p
Common NameMIMGU_mgv1a024502mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HD-ZIP
Protein Properties Length: 208aa    MW: 23717.3 Da    PI: 4.7816
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E00626.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.74e-181266256
                      T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                       ++++f++eq++ Le+ F  ++ p  + + +LA+klgL+ rq+ +WFqN+Ra+ k
  Migut.E00626.1.p 12 NNKRRFSDEQIQSLETTFGTESRPELRLKHHLADKLGLQPRQIAIWFQNKRARSK 66
                      56789************************************************99 PP
2HD-ZIP_I/II104.31e-3313104293
       HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                       +krr+s+eq+++LE++F +e++ e + K++la +Lglqprq+a+WFqn+RAR k+k +E++y+ Lk++yd+l+ + e+L+ke+++L  ++++
  Migut.E00626.1.p  13 NKRRFSDEQIQSLETTFGTESRPELRLKHHLADKLGLQPRQIAIWFQNKRARSKSKMIEQEYSELKSSYDNLALQFEALRKENQTLLIQVQR 104
                       79************************************************************************************988875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007117.248868IPR001356Homeobox domain
SuperFamilySSF466891.24E-16979IPR009057Homeodomain-like
SMARTSM003893.3E-151072IPR001356Homeobox domain
CDDcd000863.70E-131169No hitNo description
PfamPF000461.7E-151266IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.609.4E-171475IPR009057Homeodomain-like
PROSITE patternPS0002704366IPR017970Homeobox, conserved site
PfamPF021831.6E-1368109IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    Send to blast
MSTTSAKNSN KNNKRRFSDE QIQSLETTFG TESRPELRLK HHLADKLGLQ PRQIAIWFQN  60
KRARSKSKMI EQEYSELKSS YDNLALQFEA LRKENQTLLI QVQRLRKMTE KSDGEENDHE  120
NQITPPKTSE NPTFLLDMNN HDMCVTSCSD LNRKIDYLEE DAADILNMAE IAEDSLLASP  180
ENGCSFDSCA FLDNTAAGGT TSQWWDF*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00320DAPTransfer from AT2G46680Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E00626.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012842101.11e-154PREDICTED: homeobox-leucine zipper protein ATHB-12-like
TrEMBLA0A022QXY41e-142A0A022QXY4_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA102732125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61890.13e-36homeobox 12