PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E00715.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 530aa    MW: 59313.3 Da    PI: 5.2027
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E00715.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM172.81e-53141511128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                       lp+GfrF+Ptdeelv++yL+ k++g++ +++ vi+evd++k+ePwdLp+   +k++++ew+fF++rd+ky++g+r+nrat++gyWkatgkd++
  Migut.E00715.1.p  14 LPKGFRFRPTDEELVNHYLRLKINGRHSDVDVVIPEVDVCKWEPWDLPAlsVIKSGDQEWFFFCPRDRKYPNGNRSNRATEAGYWKATGKDRT 106
                       799***************************778***************44588999************************************* PP

               NAM  92 vlsk........kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++s+        +++l+g+kktLvf++grapkge+t+W+mheyr+
  Migut.E00715.1.p 107 IKSHkssslgrsTSQLIGMKKTLVFHRGRAPKGERTNWIMHEYRA 151
                       **98777776666666***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.66E-619174IPR003441NAC domain
PROSITE profilePS5100558.73814174IPR003441NAC domain
PfamPF023658.1E-2815150IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0071470Biological Processcellular response to osmotic stress
GO:1900426Biological Processpositive regulation of defense response to bacterium
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0005886Cellular Componentplasma membrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005516Molecular Functioncalmodulin binding
Sequence ? help Back to Top
Protein Sequence    Length: 530 aa     Download sequence    Send to blast
MGTCRRNTMK LESLPKGFRF RPTDEELVNH YLRLKINGRH SDVDVVIPEV DVCKWEPWDL  60
PALSVIKSGD QEWFFFCPRD RKYPNGNRSN RATEAGYWKA TGKDRTIKSH KSSSLGRSTS  120
QLIGMKKTLV FHRGRAPKGE RTNWIMHEYR ATGPDLDGTG PGQGDYVLCR LFDKADEKLD  180
YLKTDEVEHA SSSHLFQESA MLDVRMQMLE EPEDLNKWWV DLTDTCASEG VDQSGEETAM  240
EVYEPLRDAL MSEGAMQSNG YTDLFADDFG DGQNGLNFQD GTSEQDASLS ELLEGLQNHD  300
SNYSYEDSSN SDTSAVTNKS SVPGPTGGLE QTTSAIYEGQ ICGNLLHAEQ SSCQTHLQYG  360
VKEVDSSIDI VGGTCYRPVQ TLCHLYHVKD DTTPVSETGI KIRTHRPRVR PVIVNRIAQG  420
TAPRRFRLLY DCRPIAVCYA NFKGEEQESE PLITQELEGS FPNENKETVK TCDPVPDAAK  480
RGSAKAASFT SLFVRQGSSY YAVGAFMVII LSLVFIGMWR CPNFRCSAW*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A2e-4511747168NAC domain-containing protein 19
3swm_B2e-4511747168NAC domain-containing protein 19
3swm_C2e-4511747168NAC domain-containing protein 19
3swm_D2e-4511747168NAC domain-containing protein 19
3swp_A2e-4511747168NAC domain-containing protein 19
3swp_B2e-4511747168NAC domain-containing protein 19
3swp_C2e-4511747168NAC domain-containing protein 19
3swp_D2e-4511747168NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00108PBMTransfer from AT4G35580Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E00715.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012839656.10.0PREDICTED: protein NTM1-like 9
TrEMBLA0A022R7E40.0A0A022R7E4_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.E00715.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14316710
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.11e-106NAC transcription factor-like 9