PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E00748.1.p
Common NameLOC105963220, MIMGU_mgv1a021033mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family G2-like
Protein Properties Length: 353aa    MW: 39181.8 Da    PI: 9.5426
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E00748.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.13.4e-32189242255
           G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  Migut.E00748.1.p 189 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 242
                       9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.56E-15186243IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.5E-28187243IPR009057Homeodomain-like
TIGRFAMsTIGR015572.2E-23189242IPR006447Myb domain, plants
PfamPF002492.2E-7190241IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009944Biological Processpolarity specification of adaxial/abaxial axis
GO:0048481Biological Processplant ovule development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MELFPAHPDL SLQISPPNNT SIKPSPPSSS TGWRRTSDQD EVVDMAFWRR ALDSRNSTAT  60
ATATAKPPPP ANNSNYYSSS NQYFHRHLLH GGAGFLRQGL SAGEELGFLR PIRGVPVYQN  120
PPSFPFATAA AHHHHHHHQQ QQHLEAPPPQ LMAASSGGGG VNHINTSAGV LMRSRLLSRF  180
PAKRSMRAPR MRWTTTLHAR FVHAVELLGG HERATPKSVL ELMDVKDLTL AHVKSHLQMY  240
RTVKSTDRAP ANSGQSDVYE NGSSGDTSDD FLFDIQNMQK SDQIKGRQIN IDQDEYHGMW  300
SNSSSGEAAA WLHGRPNDSE RNVQSLEVQL FEREITKIPL HPLSKFFPMS II*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A3e-16190244458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B3e-16190244458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A3e-16190244357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-16190244357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-16190244357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-16190244357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A3e-16190244458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C3e-16190244458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D3e-16190244458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F3e-16190244458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H3e-16190244458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J3e-16190244458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that regulates lateral organ polarity. Promotes abaxial cell fate during lateral organd formation. Functions with KAN1 in the specification of polarity of the ovule outer integument. {ECO:0000269|PubMed:11525739, ECO:0000269|PubMed:15286295, ECO:0000269|PubMed:16623911, ECO:0000269|PubMed:17307928}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00174DAPTransfer from AT1G32240Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E00748.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012843064.10.0PREDICTED: probable transcription factor KAN2
SwissprotQ9C6162e-76KAN2_ARATH; Probable transcription factor KAN2
TrEMBLA0A022S0060.0A0A022S006_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27382255
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.13e-62G2-like family protein
Publications ? help Back to Top
  1. Machida C,Nakagawa A,Kojima S,Takahashi H,Machida Y
    The complex of ASYMMETRIC LEAVES (AS) proteins plays a central role in antagonistic interactions of genes for leaf polarity specification in Arabidopsis.
    Wiley Interdiscip Rev Dev Biol, 2015 Nov-Dec. 4(6): p. 655-71
    [PMID:26108442]