PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E00808.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family CPP
Protein Properties Length: 126aa    MW: 14007 Da    PI: 8.0804
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E00808.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR45.51.5e-145997341
               TCR  3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41
                       ++C+Ck s+Clk+YC+C a+g++C+++C+C +C+N+e 
  Migut.E00808.1.p 59 PRKCKCKESRCLKLYCKCLASGTFCNDSCNCVNCHNNEG 97
                      589*********************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011147.3E-135798IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163415.72458125IPR005172CRC domain
PfamPF036381.5E-116096IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    Send to blast
MEQREREDFP PKNQPESEAS SLGRNLVRQL DLISNVEQPL PPAAPPVVNE GKYAIPKKPR  60
KCKCKESRCL KLYCKCLASG TFCNDSCNCV NCHNNEGNKA ARDEAVNAIF ERNPELCGRL  120
PLSQF*
Functional Description ? help Back to Top
Source Description
UniProtPlays a role in development of both male and female reproductive tissues. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E00808.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012842740.15e-24PREDICTED: protein tesmin/TSO1-like CXC 5
SwissprotQ9SZD15e-20TCX5_ARATH; Protein tesmin/TSO1-like CXC 5
TrEMBLA0A4D9C5L52e-24A0A4D9C5L5_SALSN; Uncharacterized protein
STRINGMigut.E00808.1.p1e-85(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29000.12e-22Tesmin/TSO1-like CXC domain-containing protein