PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E00904.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 143aa    MW: 16395.7 Da    PI: 8.282
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E00904.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM33.99.2e-11750347
               NAM  3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdL 47
                       G+rF Ptdeel+ +yL kk+++++l++ +vi+ v+  ++ P  L
  Migut.E00904.1.p  7 SGYRFVPTDEELIFHYLLKKINNHPLPA-DVIQVVNFSDHGPDIL 50
                      69**************************.99********999877 PP
2NAM478.4e-155110078127
               NAM  78 tksgyWkatgkdkevlskkgelvglkktLvfykg.rapkgektdWvmheyr 127
                       t++g+Wka+  dk+++  +++ +g k tLvf++g ++++g ktdW+mhey+
  Migut.E00904.1.p  51 THNGFWKASCADKDIKF-NNKIIGRKMTLVFHEGiSSKDGIKTDWIMHEYT 100
                       899*************9.999************989999***********7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.1731128IPR003441NAC domain
SuperFamilySSF1019418.5E-326127IPR003441NAC domain
PfamPF023654.1E-177100IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    Send to blast
MESKHSSGYR FVPTDEELIF HYLLKKINNH PLPADVIQVV NFSDHGPDIL THNGFWKASC  60
ADKDIKFNNK IIGRKMTLVF HEGISSKDGI KTDWIMHEYT TIHHSRNKRD AEDNMKLDDW  120
VICRIHKNVS NQAVLINGGR IS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A2e-21813123171NAC domain-containing protein 19
3swm_B2e-21813123171NAC domain-containing protein 19
3swm_C2e-21813123171NAC domain-containing protein 19
3swm_D2e-21813123171NAC domain-containing protein 19
3swp_A2e-21813123171NAC domain-containing protein 19
3swp_B2e-21813123171NAC domain-containing protein 19
3swp_C2e-21813123171NAC domain-containing protein 19
3swp_D2e-21813123171NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E00904.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012840108.17e-74PREDICTED: NAC transcription factor 29-like
TrEMBLA0A022R8A91e-72A0A022R8A9_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.E00904.1.p1e-102(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14648210
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.21e-24NAC family protein