PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E00926.1.p
Common NameMIMGU_mgv1a024790mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 233aa    MW: 25856.1 Da    PI: 7.1913
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E00926.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.000247395123
                      EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                      y C+ C + F++   L  H+++H
  Migut.E00926.1.p 73 YMCTFCRREFRSAQALGGHMNVH 95
                      89*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576673.47E-670100No hitNo description
PROSITE profilePS5015711.05373100IPR007087Zinc finger, C2H2
PROSITE patternPS0002807595IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MAAEFVALLS LTQSSPKSNQ FQTQFIIRLR NSEPPPMWSN KQTPPGDDSW EVRAFEEDTT  60
GNLLGCTWPP RSYMCTFCRR EFRSAQALGG HMNVHRRDRA RLHAELPMPP LPPVSPSPAT  120
TGQEFVGNGL CLVYPLHNPN NSISISTTVL FPAPPVPDNF RSPPLPISHF FKSEPNCETA  180
PHSVVSSLCH SSKTKPSPSN SNENCDKNKN LTKADAIEEL DLELRLGRRD EH*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1njq_A3e-126895229superman protein
2l1o_A3e-126895229Transcriptional regulator SUPERMAN
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E00926.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHM4533370.0HM453337.1 Mimulus guttatus palmate-like pentafoliata 1 transcription factor (PALM1) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012857465.11e-157PREDICTED: transcriptional regulator SUPERMAN
TrEMBLA0A022RYQ31e-170A0A022RYQ3_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA59532133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.16e-30C2H2 family protein