PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E00958.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family Nin-like
Protein Properties Length: 794aa    MW: 91914.2 Da    PI: 7.1488
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E00958.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK551.6e-17645686445
            RWP-RK   4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWP 45 
                       +++le l+ +F  ++kd+AkeLgv+ +++Kr+CR+yGI+RWP
  Migut.E00958.1.p 645 NLTLEALKPHFGTKLKDVAKELGVSISTIKRACREYGIDRWP 686
                       89**************************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151913.242628717IPR003035RWP-RK domain
PfamPF020426.9E-16645686IPR003035RWP-RK domain
Gene3DG3DSA:1.10.10.604.6E-4648683IPR009057Homeodomain-like
SMARTSM006669.0E-5706791IPR000270PB1 domain
Gene3DG3DSA:3.10.20.2401.0E-10724789No hitNo description
SuperFamilySSF542771.77E-11726791No hitNo description
PfamPF005647.1E-10726789IPR000270PB1 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 794 aa     Download sequence    Send to blast
MEISKYITYS NASFDYSHEY RFNNVRKVNL MNKKSSFCGN ICDFKISAEN PRAHFAQLLR  60
LSVRYEICLE SMQNSNEVYI VEFFLQSNNN RREDGSFVYM LSRIMERVLK SIKLSPGGQL  120
GDEDLVVDPP HALRHESINY TQERKNQLLE EINMLEVIEG YKEQFSLMDF TKYLQKTDPF  180
FGEQKIEGGF FWRRNSFQPH VILSVEDKIT YFMSRIIQGM SYSLVQFWAP KFEENRCCIT  240
TFDQPFAVGY LAKGLASFRK KSMKHVYYVD EGAKDEQVGP LGRVFRSRSS EFTPDMRLYS  300
TTEFPLKNHA ARCHLREYFV LPIFDLLEPD ECVGVLEFVG FTYFPFEDIQ KELEVLSDIF  360
LSLSLSHIVL HFSSENNVNT LQAANLSISD SRQWALREIE ETLEVVVKIP QLHRAEVWAT  420
CTRCAFEKDN RLNCMELTRV MYELYYRELY EEFGYEEHIY PKMLEFSHIH TKKGITGMVL  480
ASKNKSCFFR NSCHFSIVEQ PLAHYLQKER IGSCFAICLQ STHTGNLVYV LEFFLNQGPG  540
KNEHIVSFLN FLLPILKKYL KIFTIASGQQ LGDELAIEVP VFSGEDELRG REHQHSGHQQ  600
RPIIVVDDMD SVASTSHAEH LISSVAANSN KIKGGKKMKK TGRLNLTLEA LKPHFGTKLK  660
DVAKELGVSI STIKRACREY GIDRWPCNEN HKKNPSLFEV ERADKYPQKN ICNNRQNLAQ  720
ASTDQSRPLG MEKLVEEVAN RLKLEMGSFK LKYLDEENEE ILLTRDSDLL HCPKYPTASG  780
ESFIKLFVRL SRK*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E00958.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012852556.10.0PREDICTED: protein NLP7-like isoform X1
STRINGMigut.E00958.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1569425
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.13e-48NIN like protein 7