PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E01244.1.p
Common NameLOC105955090, MIMGU_mgv1a025098mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family M-type_MADS
Protein Properties Length: 163aa    MW: 17740.4 Da    PI: 10.2854
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E01244.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF50.62.5e-16954146
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEE CS
            SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkl 46
                      k ie k +r++tf+kRr+g++KK +  ++L d ++avi+fs  g++
  Migut.E01244.1.p  9 KAIEVKAKRHTTFTKRRQGLFKKTQDYCTLSDSQAAVIVFSAAGNF 54
                      67999*************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5006619.666161IPR002100Transcription factor, MADS-box
SMARTSM004322.4E-20160IPR002100Transcription factor, MADS-box
SuperFamilySSF554551.29E-18173IPR002100Transcription factor, MADS-box
PRINTSPR004047.3E-13323IPR002100Transcription factor, MADS-box
PfamPF003191.1E-151155IPR002100Transcription factor, MADS-box
PRINTSPR004047.3E-132338IPR002100Transcription factor, MADS-box
PRINTSPR004047.3E-133859IPR002100Transcription factor, MADS-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    Send to blast
MVRRRVEIKA IEVKAKRHTT FTKRRQGLFK KTQDYCTLSD SQAAVIVFSA AGNFFGLGHP  60
SLNLLVNRYI SHPKSVFGKE AAGAGGPRVL DGGGAEDGPA EPLPLTETER RIVEAIERKR  120
WDSAVGDLVP EELSELAAEV EKIKLMVAAR KKEIKGKSKV DG*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E01244.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012834242.11e-115PREDICTED: MADS-box transcription factor 17-like
TrEMBLA0A022RM401e-113A0A022RM40_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA4024625
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65360.12e-17AGAMOUS-like 23