PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E01394.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family Trihelix
Protein Properties Length: 348aa    MW: 40564.6 Da    PI: 9.7133
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E01394.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix77.52.1e-2484165186
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                       +W++qe+++ ie+r ++e ++ ++k++k+lWe+v+++mre+g++r++ qCk+kw+nl +ryk  ++++ ++     ++cp+f++l+
  Migut.E01394.1.p  84 QWSNQETREFIEIRAQLEWDFITAKRNKNLWEAVANRMREKGYRRTADQCKCKWKNLVNRYKGQEASDVEN----GRQCPFFNELH 165
                       7****************************************************************999984....668******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500908.31677141IPR017877Myb-like domain
PfamPF138374.3E-2383166No hitNo description
CDDcd122037.65E-2483146No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    Send to blast
MYNNIGDVSS HLPSSSSGGG GGGAAATPRN PIIPYALLHH HHHQVHHPIM IPHLPPPPLP  60
QFSPPGGADD GGDDFPRRDE RVPQWSNQET REFIEIRAQL EWDFITAKRN KNLWEAVANR  120
MREKGYRRTA DQCKCKWKNL VNRYKGQEAS DVENGRQCPF FNELHTVFTA RANQMPPHVD  180
TESTGISKGK KRLINISEDQ SHHEEFSEDE TTVPKRKPGR EKKQQKIAGK KEIYSNKNES  240
ILNGLRETMR GFMAQQQRID VQWKDTVKKR AHQRDIFEQE WRQTMERLER ERLLMERAWR  300
EREEQRRSRE ENRAVKRDAL LTTLLNKLLR DEISEFIAVE TNFFIHT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ebi_A1e-1280155277DNA binding protein GT-1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E01394.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012847080.10.0PREDICTED: trihelix transcription factor GT-3b-like
TrEMBLA0A022QMG90.0A0A022QMG9_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.E01394.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA101331923
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01380.15e-33Trihelix family protein