PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E01471.2.p
Common NameMIMGU_mgv1a022163mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family CPP
Protein Properties Length: 943aa    MW: 103563 Da    PI: 5.7939
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E01471.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR43.94.6e-14521559341
               TCR   3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 
                       +k+CnCk+ kClk+YC+Cfaag +C+++C C++C+N+ e
  Migut.E01471.2.p 521 CKNCNCKRNKCLKLYCDCFAAGIYCADSCACQECFNRPE 559
                       79**********************************876 PP
2TCR48.81.4e-15608646139
               TCR   1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 
                       ++k+gCnCkks ClkkYC C++a++ Cs+ C+Ce+CkN 
  Migut.E01471.2.p 608 RHKRGCNCKKSMCLKKYCVCYQANVGCSDGCRCEGCKNV 646
                       589***********************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011141.0E-12519560IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163433.983520648IPR005172CRC domain
PfamPF036381.5E-10522557IPR005172CRC domain
SMARTSM011141.6E-16608649IPR033467Tesmin/TSO1-like CXC domain
PfamPF036384.5E-11610645IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 943 aa     Download sequence    Send to blast
MDSPESSKPT PIAAETAAIA QDSPVFSFIS NLSPIQPVKA PSVRQDFVEV NSPPLVFKSP  60
RLNPRSQLMS LKRSQFPRQI LSELPGQDEH GMNSVPTTKL DEKPDIQLCT NEEEGSDRNR  120
PVNDLERSAI GSSEQFLRDT MIMDSVGSEF SLDSTMRKSE CIDQPLNAVV KLDSELNSRI  180
SEEVGLAPPF ISRQGEEVRK ENIPVDARGT EIDKTQGDGD YVDQCPQIGH ELPVDNALTS  240
RDKENYVTEN VEAGQVALLD PSSYLLSGPT EIGKRNESFV EANGAALTEP FLKKVQNDPE  300
VFQHGGTRRR CLQFQDSQYK AILNQSAEIP SNCDGIKSLS LETPSMPING KHDEVTQLVR  360
YPKNYSNSTI NIPKPSGIGL HLNSIVNTVQ PGSGAIVNVK SAHGNLSVTR KKSTLTINPR  420
LSEYSNSSSV LSVVENALEN TDDNTHEIQD SAVAMTAMPL SNHIVQPSNN TVVLNSVGDQ  480
STPGNKRNYT ETDDGSDDFN YKSSPKNKRM KSSDPGNAGG CKNCNCKRNK CLKLYCDCFA  540
AGIYCADSCA CQECFNRPEY EDTVLETRQK IESRNPLAFA PKIVQQAIEQ PATIHAEDGT  600
NFTPSSARHK RGCNCKKSMC LKKYCVCYQA NVGCSDGCRC EGCKNVFGQK GEYGMIKDVW  660
NEKDTNVTTN GSFLEKCEIE PSGNGVHRDE LYNLHNLSPI TPAFDFSNHG KDASKAWCHS  720
GKYFESPEPG YTFVAPYMMS SESSRSSDNH VLNSETGEGI LDRVSFEQSH HGNSEMVDEL  780
LSAEFHHPGT MGRLSSTPNL KNWADNSKSQ PFPAQRHSSG SSLVWGGSPQ TPMAQFSGTK  840
MHRELQFDSG LSSIAEDDRP EILKDNSTPN DAVKVSSPNK KRVSPPHRRQ NEFDSSSLAG  900
LTSGRKFILQ AIPSFPPLTP CVDSETVTTQ HKIDPQNRNV HK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5fd3_A5e-1652264612121Protein lin-54 homolog
5fd3_B5e-1652264612121Protein lin-54 homolog
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E01471.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012847197.10.0PREDICTED: CRC domain-containing protein TSO1-like
TrEMBLA0A022QRT30.0A0A022QRT3_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.E01471.1.p0.0(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22780.11e-47Tesmin/TSO1-like CXC domain-containing protein