PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E01599.1.p
Common NameMIMGU_mgv1a021658mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 139aa    MW: 15645.5 Da    PI: 10.1026
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E01599.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.92.3e-1099130135
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TT CS
               HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskaps 35 
                       +r++h  +Er+RR+++N+ ++ Lr+l+P++   ++
  Migut.E01599.1.p  99 QRMTHITVERNRRRQMNEYLAVLRSLMPPS---YA 130
                       79**************************97...44 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.32E-897132No hitNo description
Gene3DG3DSA:4.10.280.101.9E-897130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.82E-997133IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.62398138IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-799130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    Send to blast
MAMEAVIKQQ DDTTSIYGEK DCNYNNMGYG ERGSNNGYYN WDPPPPYSVA RTTTSSPDTC  60
VGPAGDGFFA GGVHSPAGSR RRRRRRTKNF KNKEEMEKQR MTHITVERNR RRQMNEYLAV  120
LRSLMPPSYA QRVTAGGV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17985RRRRRRR
28186RRRRRT
399110RMTHITVERNRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E01599.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP2575477e-36KP257547.1 Salvia miltiorrhiza clone 115 basic helix-loop-helix transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015057803.18e-33transcription factor bHLH96-like
TrEMBLA0A022QUM29e-95A0A022QUM2_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.E01599.1.p1e-100(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19962462
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.11e-20bHLH family protein