PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E01637.1.p
Common NameLOC105954136, MIMGU_mgv1a026621mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family DBB
Protein Properties Length: 118aa    MW: 12833.8 Da    PI: 7.869
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E01637.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box21.83.8e-07447542
          zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
                       C+ +e   ++  C + +  lC  C l  H g      H++ pl
  Migut.E01637.1.p  4 QCDACEAAAAEVVCCTEEAALCGGCDLRNHAGntmatnHQRLPL 47
                      7******99*********************88999999998775 PP
2zf-B_box30.95.7e-105394438
          zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg.......Ht 38
                      ++C++++e    lfC ++++ lC++C  ++Hk+       H+
  Migut.E01637.1.p 53 PRCDTCQETLGWLFCLEDRVVLCRQCDISTHKSrpfgsghHR 94
                      79******9999*******************99899999555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501199.627147IPR000315B-box-type zinc finger
SMARTSM003365.7E-4447IPR000315B-box-type zinc finger
SMARTSM003361.5E-75097IPR000315B-box-type zinc finger
PfamPF006433.3E-75393IPR000315B-box-type zinc finger
CDDcd000211.94E-55397No hitNo description
PROSITE profilePS501198.9025597IPR000315B-box-type zinc finger
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    Send to blast
MKIQCDACEA AAAEVVCCTE EAALCGGCDL RNHAGNTMAT NHQRLPLSTA LRPRCDTCQE  60
TLGWLFCLED RVVLCRQCDI STHKSRPFGS GHHRLLLTNV KVGLHPKQST TTIKLVN*
Functional Description ? help Back to Top
Source Description
UniProtActs as positive regulator of seedling photomorphogenesis and light-regulated inhibition of hypocotyl elongation, independently and in concert with HY5 and BBX21 (PubMed:18540109, PubMed:18796637, PubMed:18182030, PubMed:21427283). Acts as a positive regulator of de-etiolation and influences chloroplast biogenesis and function through regulation of genes encoding chloroplast proteins (PubMed:18182030). Acts downstream of COP1 and plays an important role in early and long-term adjustment of the shade avoidance syndrome (SAS) responses in natural environments (PubMed:21070414). Regulates the expression of genes responsive to light hormone signals which may contribute to optimal seedling development (PubMed:21427283). {ECO:0000269|PubMed:18182030, ECO:0000269|PubMed:18540109, ECO:0000269|PubMed:18796637, ECO:0000269|PubMed:21070414, ECO:0000269|PubMed:21427283}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E01637.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light. {ECO:0000269|PubMed:18182030}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012833263.14e-82PREDICTED: B-box zinc finger protein 22-like
SwissprotQ9SYM21e-36BBX22_ARATH; B-box zinc finger protein 22
TrEMBLA0A022RM219e-81A0A022RM21_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA28922346
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78600.16e-27light-regulated zinc finger protein 1