PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.F00031.1.p
Common NameLOC105964084, MIMGU_mgv1a013180mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 229aa    MW: 26075.1 Da    PI: 10.0432
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.F00031.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM109.24.9e-34161371127
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkev 92 
                       lp GfrFhPtdee++v+yLk+k+ + +l++ ++i+e+d++++ PwdLp  +   +++ yfF+kr+++  t+ + +   t+ gyWka gkdk++
  Migut.F00031.1.p  16 LPIGFRFHPTDEEVLVHYLKRKIYSLPLPA-SAIPEFDVFQSTPWDLPGDL---REKRYFFCKRKRSPLTKCNGSSfGTDCGYWKAIGKDKQI 104
                       699***************************.88***************544...4578********99998888887899************* PP

               NAM  93 lskkgel.vglkktLvfykgrapkgektdWvmheyr 127
                       ++ +++l +g+kk++vf    +++ +kt+W+mhe  
  Migut.F00031.1.p 105 IAPGSNLiIGIKKSFVFR---QRRDQKTQWIMHELC 137
                       **9555449********7...455568*******76 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.66E-4114165IPR003441NAC domain
PROSITE profilePS5100542.04816166IPR003441NAC domain
PfamPF023651.8E-2117136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MEKAKPEDGN GGGVKLPIGF RFHPTDEEVL VHYLKRKIYS LPLPASAIPE FDVFQSTPWD  60
LPGDLREKRY FFCKRKRSPL TKCNGSSFGT DCGYWKAIGK DKQIIAPGSN LIIGIKKSFV  120
FRQRRDQKTQ WIMHELCLVG SINTPFLAQK LMMQLGDWVV CRVHQRKRKA RNHGKLVDSK  180
KSRNLQMNLR MEEGKNEMGV SISCSSGITD TPTNELDQEE ESSHSVRF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-281416713169Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.F00031.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012844037.11e-172PREDICTED: NAC domain-containing protein 68
TrEMBLA0A022QZ791e-170A0A022QZ79_ERYGU; Uncharacterized protein
STRINGMigut.F00031.1.p1e-171(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA132501318
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.18e-45NAC domain containing protein 83