PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.F00276.1.p
Common NameLOC105971716, MIMGU_mgv1a023144mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WRKY
Protein Properties Length: 386aa    MW: 41496.1 Da    PI: 5.0564
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.F00276.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY955.2e-30182240259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                        D ++WrKYGqK++kgs++pr+YYrC+++ gC ++k+vers +dp ++++ Y+geH+h+
  Migut.F00276.1.p 182 ADSWAWRKYGQKPIKGSPYPRNYYRCSTSkGCAARKQVERSPNDPGIFVVSYTGEHTHP 240
                       69************************9988****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.6E-31167242IPR003657WRKY domain
SuperFamilySSF1182907.32E-27174242IPR003657WRKY domain
PROSITE profilePS5081132.684176242IPR003657WRKY domain
SMARTSM007742.6E-36181241IPR003657WRKY domain
PfamPF031062.6E-25183240IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    Send to blast
MDDDWDLHAV VRGCAAAAVS TNTASAAANN DDPFPSFSYM SFHDDQTSFD FPDLVVDDTN  60
GDPFQGLREI YQEFCVDDDA PPPPQTTTAP AADIAADTNW AISANPSANF FQPRQEIAQI  120
KPPQHSQENI QFNNNNNNHR PGSSSSSHNF PAAINPQPIR PRRRKNQQMK MVRQMTQEEL  180
SADSWAWRKY GQKPIKGSPY PRNYYRCSTS KGCAARKQVE RSPNDPGIFV VSYTGEHTHP  240
RPTHRSSLAG STRSKLSSST ATAKNSNNNN NAAVSHHQKS GSISSSSPPP AAAAASGSSF  300
SPNTPLMEGG AATAEKDVEM AEEENNINLM ISNDMIMNDD DDDILFKGFQ DSDHDSGGGG  360
GGGGNLFSSG LLSSPPWTPT SSAVV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B5e-181822431780Disease resistance protein RRS1
5w3x_D5e-181822431780Disease resistance protein RRS1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1160164PRRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.F00276.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKM8231413e-93KM823141.1 Salvia miltiorrhiza WRKY protein (WRKY18) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012852038.10.0PREDICTED: probable WRKY transcription factor 27
TrEMBLA0A022QC020.0A0A022QC02_ERYGU; Uncharacterized protein
STRINGMigut.F00276.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA138601014
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.12e-43WRKY DNA-binding protein 27