PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.F00404.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 239aa    MW: 27226.2 Da    PI: 9.3252
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.F00404.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.91.6e-1267119155
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                       ++r h e+Er+RR++i + ++ Lr++lP+      ++K s  +   +A +YI++ q
  Migut.F00404.1.p  67 KKRLHREVERQRRQEISTLYASLRSVLPPqH---IKGKRSTTDQIDEAAKYIRYVQ 119
                       6788*************************55...*******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.07866118IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.79E-966123No hitNo description
PfamPF000103.3E-967119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.22E-1267136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.6E-1068136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-472124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    Send to blast
MESTSSFSFL QQEDELRILN FPELATIWDD VGFDQIPPPK CIDLGDNKNG KIPKKLEKNI  60
IEDQLKKKRL HREVERQRRQ EISTLYASLR SVLPPQHIKG KRSTTDQIDE AAKYIRYVQN  120
NIKELGIKIE NLKRWSTKNE SEKGNPSKIL PVVNVNVTVQ TCSAGVEVLI STSGDILALS  180
RITQLLHQQG LTVVSCSFTK FDGRLLYTIQ SEVLDYNIAG VDIQNLQRKL QDKIRAFY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16778KRLHREVERQRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.F00404.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012852331.11e-175PREDICTED: transcription factor bHLH36-like
TrEMBLA0A022QBP41e-154A0A022QBP4_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.F00404.1.p1e-175(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA59824109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51780.11e-35bHLH family protein