PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.F00405.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

bHLH

Protein Properties

Length: 245aa MW: 27381.9 Da PI: 5.2133

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.F00405.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.7	1.5e-11	65	117	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++ ah +Er+RR+++ ++ Lr+llP ++K ++ +Av YIk++q Migut.F00405.1.p 65 KKSAHRDIERQRRQEMSLLYSSLRSLLPLeY---VKGKRAVSDHMHQAVIYIKHMQ 117 689************************77...99*****************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	2.09E-11	63	131	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	12.906	64	116	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	6.9E-9	65	117	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	6.4E-9	65	135	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence Send to blast
MFSLQNDNGG GVVLFNNEEP TIVISDEQDK ILEELLADYG GTEVNTTAAV QENNNGGTSI 60 SVESKKSAHR DIERQRRQEM SLLYSSLRSL LPLEYVKGKR AVSDHMHQAV IYIKHMQTKI 120 EEMRIKREKL NKLTNNVSET RSEDRVIIEA ANSSPNYCVE INVCNGGGIN EILISSSSID 180 NGSFSTSKVV DKLLKRGLNV ISCVSTRVDN LFLHKIQIHE ENDFTSNIDL AQLEEELVNV 240 MKRV*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.F00405.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012851908.1	1e-178	PREDICTED: transcription factor bHLH36-like
TrEMBL	A0A022R577	1e-117	A0A022R577_ERYGU; Uncharacterized protein
STRING	Migut.F00405.1.p	1e-177	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA598	24	109

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25410.1	1e-20	bHLH family protein

Link Out ? help Back to Top
Phytozome	Migut.F00405.1.p