PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.F00657.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

G2-like

Protein Properties

Length: 126aa MW: 14177.6 Da PI: 5.6366

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.F00657.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	93	2.5e-29	77	126	2	51
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 prlrWtpeLH +Fv+ave+LGG e+AtPk +l+lm+vkgL+++hvkSHLQ Migut.F00657.1.p 77 PRLRWTPELHLCFVHAVERLGGDERATPKLVLQLMNVKGLSIAHVKSHLQ 126 9************************************************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	2.5E-27	73	126	IPR009057	Homeodomain-like
PROSITE profile	PS51294	11.527	73	126	IPR017930	Myb domain
SuperFamily	SSF46689	6.81E-14	74	126	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.7E-20	77	126	IPR006447	Myb domain, plants
Pfam	PF00249	3.2E-9	78	126	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 126 aa Download sequence Send to blast
MINMQKANTT NSSSESDDQE DMENSKTTPP NLQIEDGEKD EENESNSTVE ENNNNGKNNK 60 SSNNSASVRQ YIRSKTPRLR WTPELHLCFV HAVERLGGDE RATPKLVLQL MNVKGLSIAH 120 VKSHLQ

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	2e-19	78	126	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	2e-19	78	126	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	2e-19	78	126	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	2e-19	78	126	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	2e-19	78	126	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	2e-19	78	126	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	2e-19	78	126	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	2e-19	78	126	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	2e-19	78	126	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	2e-19	78	126	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	2e-19	78	126	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	2e-19	78	126	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.F00657.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012858127.1	7e-73	PREDICTED: probable transcription factor KAN4
TrEMBL	A0A022PW70	1e-71	A0A022PW70_ERYGU; Uncharacterized protein (Fragment)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA8573	21	29

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40260.1	2e-32	G2-like family protein

Link Out ? help Back to Top
Phytozome	Migut.F00657.1.p