PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.F01022.1.p

Common Name

MIMGU_mgv1a025452mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

Nin-like

Protein Properties

Length: 237aa MW: 27172.1 Da PI: 7.7444

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.F01022.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	84.3	1.1e-26	122	171	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++++le+++k+F+ pi++AAkeL+v+lTvLK++CR+++I RWPhRkiksl Migut.F01022.1.p 122 SSLKLEEIKKHFHIPITKAAKELNVGLTVLKKRCRELNITRWPHRKIKSL 171 6899********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.484	106	191	IPR003035	RWP-RK domain
Pfam	PF02042	1.3E-23	124	171	IPR003035	RWP-RK domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009793	Biological Process	embryo development ending in seed dormancy
GO:0005634	Cellular Component	nucleus

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence Send to blast
MTNHIAPHVE LNDFEEIADD LGLWDFDQPP PLMHNNILQD QNPNPPTTMI VQENDTNHAI 60 IDHHQENDDI IVNPPPTTGS MYGSSTNNPP PQQNLDELIL PSNSSSINMD ARRNGATRYK 120 SSSLKLEEIK KHFHIPITKA AKELNVGLTV LKKRCRELNI TRWPHRKIKS LKCLIRNVRE 180 LGLTSEIEML EEHKRMVEML PEMELTERTK KLRQACFKAN YKKRRSLLHQ QATALA*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.F01022.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012858066.1	1e-174	PREDICTED: protein RKD4
TrEMBL	A0A022PTG4	1e-173	A0A022PTG4_ERYGU; Uncharacterized protein (Fragment)
STRING	Migut.F01022.1.p	1e-175	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA12143	19	22

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53040.1	2e-41	RWP-RK domain-containing protein

Link Out ? help Back to Top
Phytozome	Migut.F01022.1.p