PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.F01102.2.p

Common Name

MIMGU_mgv1a002716mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

C2H2

Protein Properties

Length: 472aa MW: 52708.5 Da PI: 4.8164

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.F01102.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.9	3.8e-05	77	98	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC++C++ F ++ n++rHir+H Migut.F01102.2.p 77 KCEKCSREFCSSINYRRHIRVH 98 7*******************99 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50157	9.743	76	98	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	78	98	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0016021	Cellular Component	integral component of membrane
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 472 aa Download sequence Send to blast
MPVPKLYTSG TLNAIKSEEE NDSLDTVIRQ AIVKDPLLPF SRTGDNPVQW FQLLHALDQP 60 DLAGWPLMTP VKVQMQKCEK CSREFCSSIN YRRHIRVHRR SLNVNKESDK HRGLLAAFWD 120 KLSLEEAMEV VSFGDVSLKE IPGTSVIVAL TSFLHQPGVW ALPQFYVKAG STLLDIIQGN 180 PSRLPSSEEL FNILDDASER TFLCAGTAES VQKYLFAGEA AKNNLELKNL VACTSFLFEQ 240 KLVKAWLAEQ DAEALRCQKL LVEEEEAAQK RQAELLERKK QKKLRRKEQK MKEEIHGCKG 300 DLNVVIALSA ADGPVSTEAY GLSSPSDSCS NSEDMATNLD PGLETMQLQI EESEKDLEAQ 360 IDSTSEFINQ GHTHNIEPQI VSENDSQHLT TNNWQEVSNS QRVADNGFHE CRNLQILEPN 420 SVEIVGVSSD LTGNKVLTEK HKTEGDEKSL KPPFFMEETN YQVVIGSIPI A*

Sequence ? help Back to Top

Protein Sequence Length: 472 aa Download sequence Send to blast

MPVPKLYTSG TLNAIKSEEE NDSLDTVIRQ AIVKDPLLPF SRTGDNPVQW FQLLHALDQP  60
DLAGWPLMTP VKVQMQKCEK CSREFCSSIN YRRHIRVHRR SLNVNKESDK HRGLLAAFWD  120
KLSLEEAMEV VSFGDVSLKE IPGTSVIVAL TSFLHQPGVW ALPQFYVKAG STLLDIIQGN  180
PSRLPSSEEL FNILDDASER TFLCAGTAES VQKYLFAGEA AKNNLELKNL VACTSFLFEQ  240
KLVKAWLAEQ DAEALRCQKL LVEEEEAAQK RQAELLERKK QKKLRRKEQK MKEEIHGCKG  300
DLNVVIALSA ADGPVSTEAY GLSSPSDSCS NSEDMATNLD PGLETMQLQI EESEKDLEAQ  360
IDSTSEFINQ GHTHNIEPQI VSENDSQHLT TNNWQEVSNS QRVADNGFHE CRNLQILEPN  420
SVEIVGVSSD LTGNKVLTEK HKTEGDEKSL KPPFFMEETN YQVVIGSIPI A*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	276	283	ERKKQKKL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.F01102.2.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012858572.1	0.0	PREDICTED: uncharacterized protein LOC105977751
TrEMBL	A0A022PT74	0.0	A0A022PT74_ERYGU; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	3e-98	C2H2-like zinc finger protein

Link Out ? help Back to Top
Phytozome	Migut.F01102.2.p