PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.F01146.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ARR-B
Protein Properties Length: 580aa    MW: 64759.7 Da    PI: 6.8455
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.F01146.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like75.76e-24222275155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       kp+++Wt  LH+rF+ea++++ G ++ +Pk+ile m+v+gLt+e+v+SHLQkYR+
  Migut.F01146.1.p 222 KPKIVWTDSLHNRFLEAIRSI-GLDRSVPKKILEEMNVPGLTRENVASHLQKYRI 275
                       799******************.********************************6 PP
2Response_reg72.71.5e-24191271109
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                       +l+vdD+ + + +++ +l+k +y ev +++++++al +l+ k   +Dl++ Di mp+m+G+el + i++e  +lp+++++a ++e  + + l+
  Migut.F01146.1.p  19 ILVVDDDLTCLAIVAAILKKFKY-EVVTVKHPSDALCTLRIKGgaFDLVVSDIHMPDMNGFELQQVITQEF-HLPVVLMSADNKEGVISKGLE 109
                       89*********************.9************99666566************************99.********************* PP

                       TTESEEEESS--HHHHHH CS
      Response_reg  92 aGakdflsKpfdpeelvk 109
                        Ga  f+sKp+ p++l++
  Migut.F01146.1.p 110 NGAAFFISKPVTPDDLRN 127
                       ***************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521726.12E-3016137IPR011006CheY-like superfamily
SMARTSM004483.6E-2517129IPR001789Signal transduction response regulator, receiver domain
Gene3DG3DSA:3.40.50.23002.0E-3217140No hitNo description
PROSITE profilePS5011034.87418133IPR001789Signal transduction response regulator, receiver domain
PfamPF000721.7E-2119127IPR001789Signal transduction response regulator, receiver domain
CDDcd001563.50E-2520132No hitNo description
PROSITE profilePS512949.577219278IPR017930Myb domain
Gene3DG3DSA:1.10.10.608.2E-25220279IPR009057Homeodomain-like
SuperFamilySSF466896.27E-18220279IPR009057Homeodomain-like
TIGRFAMsTIGR015577.4E-24222275IPR006447Myb domain, plants
PfamPF002493.0E-6226274IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 580 aa     Download sequence    Send to blast
MEGETVSSQS RKSFDTVSIL VVDDDLTCLA IVAAILKKFK YEVVTVKHPS DALCTLRIKG  60
GAFDLVVSDI HMPDMNGFEL QQVITQEFHL PVVLMSADNK EGVISKGLEN GAAFFISKPV  120
TPDDLRNLWQ FASTKKKTSS RVVINDITGS DYDLFQPREI INSNDKNRSD EKPVFVVSAS  180
TSNKDISHSK NPKRKTQTKE DSDNDEEEQI GNNNNAASTN KKPKIVWTDS LHNRFLEAIR  240
SIGLDRSVPK KILEEMNVPG LTRENVASHL QKYRIFLRRV SDASSKISGV DEKGLLSRSG  300
INRYSKYQFY HHRQNLGNFD FPSGLKMQAQ SRFGQSHLIS SNRSLFQPNI GPNNRLCGGI  360
AQRNNYEAGP LLFPGNLSSA WENPNILTPR NNVVSSIPST NFSDRTNFVG YNISNIKHLG  420
EGYSRSCNNI GEYDNRGGPE INGNGEFQNN NNINLEQLMD VVNGGEQLSD VVNANHDHQE  480
NLMPPFLGIN EGIISEGQNG DLSDVFSTPI FHQLPEFDDT TTANQLFADQ LTIQNKLPQQ  540
VLLFISFNTP VFSLIAKRSL YFIFTAKYPC NSFLLLKIR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A5e-21218281164ARR10-B
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.F01146.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A022PT370.0A0A022PT37_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32902038
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.17e-58response regulator 2