PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.F01484.1.p
Common NameLOC105951213, MIMGU_mgv1a012392mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB
Protein Properties Length: 253aa    MW: 28058.4 Da    PI: 6.7921
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.F01484.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.72.3e-17954147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      +g+W ++Ed  l+ +v+++G+++W++I++ ++ gR++k+c++rw + 
  Migut.F01484.1.p  9 KGSWNPQEDAALIALVEEHGPRNWSLISNGIP-GRSGKSCRLRWCNQ 54
                      799*****************************.***********985 PP
2Myb_DNA-binding551.9e-1763105347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       ++T+ Ed l+++a++ +G++ W+tIar ++ gRt++ +k++w++ 
  Migut.F01484.1.p  63 PFTAAEDALILQAHTVHGNR-WATIARLLP-GRTDNAIKNHWNST 105
                       89******************.*********.***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129419.285155IPR017930Myb domain
SuperFamilySSF466894.3E-307102IPR009057Homeodomain-like
SMARTSM007177.4E-16857IPR001005SANT/Myb domain
PfamPF002493.9E-17954IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.6E-241062IPR009057Homeodomain-like
CDDcd001673.25E-141153No hitNo description
PROSITE profilePS5129426.23856110IPR017930Myb domain
SMARTSM007175.3E-1560108IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.2E-2363109IPR009057Homeodomain-like
CDDcd001672.71E-1163106No hitNo description
PfamPF002498.3E-1463105IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MEEIGEKIKG SWNPQEDAAL IALVEEHGPR NWSLISNGIP GRSGKSCRLR WCNQLSPSVK  60
HRPFTAAEDA LILQAHTVHG NRWATIARLL PGRTDNAIKN HWNSTLRRKR NVRGVDTAAM  120
RRSSDESGSG SSESALKRQC SRVSQEQNSY SGGRDDLILE EGDMGTGDGL TLTLLPPGGR  180
ALESPDGEKE VRKEEIRIFD DGSSTVEIEN TCLVKIMQRI IAQEVRTYFE KLRAEGDHDI  240
GPEFESQVRR SI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gv2_A5e-3961091104MYB PROTO-ONCOGENE PROTEIN
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.F01484.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012830054.10.0PREDICTED: transcription factor MYB44-like
SwissprotO231602e-50MYB73_ARATH; Transcription factor MYB73
TrEMBLA0A022RUN70.0A0A022RUN7_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA128831620
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23290.13e-52myb domain protein 70
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]