PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.F01687.1.p
Common NameMIMGU_mgv1a002437mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 524aa    MW: 58736 Da    PI: 4.5233
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.F01687.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM171.23.2e-53161431128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                       l+pGfrFhPtdeelv +yL++k+ gk++++ ++i+evd+yk+ePwdLp k k+k+++ ewyfFs  dkky +g r+nrat++gyWk+tgkd++
  Migut.F01687.1.p  16 LAPGFRFHPTDEELVRYYLRRKIFGKSFRF-DAISEVDVYKSEPWDLPyKsKLKTRDLEWYFFSVLDKKYGNGARTNRATEKGYWKTTGKDRA 107
                       579**************************9.99***************5347777778*********************************** PP

               NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       v++ ++++ g+kktLv+++grapkg++t+Wvmheyrl
  Migut.F01687.1.p 108 VYH-RTKVSGMKKTLVYHSGRAPKGQRTNWVMHEYRL 143
                       ***.9999***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.89E-6114166IPR003441NAC domain
PROSITE profilePS5100557.35216166IPR003441NAC domain
PfamPF023653.3E-2718143IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 524 aa     Download sequence    Send to blast
MLMESIAGKK KSTSLLAPGF RFHPTDEELV RYYLRRKIFG KSFRFDAISE VDVYKSEPWD  60
LPYKSKLKTR DLEWYFFSVL DKKYGNGART NRATEKGYWK TTGKDRAVYH RTKVSGMKKT  120
LVYHSGRAPK GQRTNWVMHE YRLTDVDFNT AGITQDAFVL CRIFQKSGSG PKNGEQYGAP  180
FVEEEWDNDE LESLPEDEAK DEVDFGGDAF LDAHDLQQIL QSDVPPSTAP LSGNLIFSDG  240
SYGEENTSSF NHTENLSVCA GNQYHDGSTY NLPASCDMEL VKQESYGECS KSSNSEELDF  300
LLDEPFFDSS DNLLYGNEGF IEANDFLSPV ENDNSAFDML NEYLSFDAND DNSLYFANDS  360
ASMFGTDGLV SEQPLLPHKE MTEETAQAIL PNGQHIANNN NNEVLPSDKQ ESAKQYSGLD  420
YPFIKQASKI LGNLPAPPAF AAEFPSKNAI LRLNGAKDEN FNVIVSFGYS RGNDGSSNLE  480
SSVRIQTGKA ASSAMSRGWL FFVFFFFVFF SMTFKYGTYL CAN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-461617215174Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.F01687.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012843323.10.0PREDICTED: NAC domain-containing protein 78-like
TrEMBLA0A022QX530.0A0A022QX53_ERYGU; Uncharacterized protein
STRINGMigut.F01687.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31412450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-113NAC domain containing protein 2