PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.G00203.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 229aa    MW: 25823.5 Da    PI: 8.0416
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.G00203.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.24.6e-1170118555
                       HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                       ++  Er+RR+++   f+ L +++P+ +   ++ K++  ++  +Av+YIk+L+
  Migut.G00203.1.p  70 NSLKERKRREKLSGNFSVLTSMVPNlS---NNYKPTRETVINEAVNYIKHLE 118
                       6778*********************55...********************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.57665117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-870118IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.02E-1471136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-771123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.67E-871120No hitNo description
Gene3DG3DSA:4.10.280.109.8E-1272134IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS516718.596162228IPR002912ACT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MRDLGKEMLS KQQEIEEEEE IRKLLLGIME DYYDSVIPPL SFFSPSSGIS VADQKSGTKR  60
QRNEDSCDEN SLKERKRREK LSGNFSVLTS MVPNLSNNYK PTRETVINEA VNYIKHLEEE  120
AKRLEGLKQF QLEEPMMESP VLLKCTNQNS SVKVAVSSES TFLSVQLPSR RGSALKIVKV  180
IEKHRARVLE ARICVNEQRQ LTFTATITLG KGGGSSTIDK IREEILSL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17177LKERKRR
27378ERKRRE
37479RKRREK
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.G00203.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012858827.11e-165PREDICTED: transcription factor bHLH18-like
STRINGMigut.G00203.1.p1e-164(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA132481415
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46510.13e-11ABA-inducible BHLH-type transcription factor