PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.G00276.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 256aa    MW: 28771.5 Da    PI: 4.3924
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.G00276.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP227.11e-087342855
               AP2 28 rkrfslgkfgtaeeAakaaiaarkkleg 55
                      + r++lg+f+ta+eAa a+++a+++++g
  Migut.G00276.1.p  7 KERHWLGTFDTAQEAALAYDRAALSIKG 34
                      389*********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103212.576142IPR001471AP2/ERF domain
CDDcd000185.61E-17141No hitNo description
Gene3DG3DSA:3.30.730.105.7E-16141IPR001471AP2/ERF domain
SMARTSM003802.4E-10148IPR001471AP2/ERF domain
SuperFamilySSF541714.32E-11342IPR016177DNA-binding domain
PfamPF008472.3E-4834IPR001471AP2/ERF domain
SuperFamilySSF1014473.4E-56974No hitNo description
SuperFamilySSF1014473.4E-5147170No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
IRDLTTKERH WLGTFDTAQE AALAYDRAAL SIKGTQARTN FIYTTDHNTT FHSLIWNPFD  60
QFHNPLHQPP PPPPQQQTKP PPPPPIPQPV VQPENDTCHS HDSTNSGYLL DCIVPNNCLN  120
PSSSKRVSSS ENNANNNNNP MTMYEDYNLQ ELGGGAHCGL MWDHQQQCYT WGEEETTMSS  180
NSSCELTAMI NEQYSFMVQN NNNINNNQMC DQNNNNNNNN DNIISFDEMM MMMMDPAATS  240
FGDSSLDHVI GHSLF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.G00276.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012855456.11e-137PREDICTED: ethylene-responsive transcription factor ERF086-like, partial
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA93072125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.13e-23ERF family protein