PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.G00370.1.p
Common NameMIMGU_mgv1a001692mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family CPP
Protein Properties Length: 788aa    MW: 85484.3 Da    PI: 5.1957
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.G00370.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR50.63.9e-16484522240
               TCR   2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 
                        +k+CnCkkskClk+YCeCfaag++C e C C dC+Nk 
  Migut.G00370.1.p 484 ACKRCNCKKSKCLKLYCECFAAGVYCVEPCACIDCFNKP 522
                       589**********************************96 PP
2TCR51.12.7e-16569607139
               TCR   1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 
                       ++k+gCnCkks ClkkYCeC++ g+ Cs +C+Ce+CkN 
  Migut.G00370.1.p 569 RHKRGCNCKKSGCLKKYCECYQGGVGCSINCRCEGCKNA 607
                       589***********************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011142.7E-18483524IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163437.06484609IPR005172CRC domain
PfamPF036387.0E-12486521IPR005172CRC domain
SMARTSM011147.5E-18569610IPR033467Tesmin/TSO1-like CXC domain
PfamPF036387.7E-12571607IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 788 aa     Download sequence    Send to blast
MGAGVETSSI EEGEVMDTPE RTKNHQIATS VTKFEDSPVF NFLNNLSPIK PVKSAHISQT  60
INPLSFSTIP SVFTSPHVTS LKESRFLRRH QLSDPSKPEF STDRNKAIVD AGPTKKSDEL  120
QENVDTRESD ADVAACHSSY DCSKYIVDFA EGYDFSSPNA SCGLKDKHVS VPFVQNNNME  180
GVSQSQVIDR NQESKTCDWD SLISDATDLL IFESPNDADT YKKSMIDNGM SFYTSMDSDM  240
QNMQSLCAEG SGEQFLEGNE TENLSTQPGE GIEIIENNSE THEIVGGSSM EDNSDEKMDY  300
EHLSGMYRGM RRRCLVFEMS GSRRKHLTQN VGPDSSSSSS SVLMQSDGNM ESSSNGQKLA  360
PIKTANIEST TRCVLPGIGL HLNALASTTK DYKIVGHDSS SASGRLLIGP SSSVNFSPLT  420
IEQDPLTSVL PVTPSEREVV GTEVTVLPPE DACEASGLIG NEEIGHSSPK KKRRRVEQAG  480
EAEACKRCNC KKSKCLKLYC ECFAAGVYCV EPCACIDCFN KPIHEDTVLA TRKQIESRNP  540
LAFAPKVIKG PDSLIETGDD SSKTPASARH KRGCNCKKSG CLKKYCECYQ GGVGCSINCR  600
CEGCKNAFGR KDGSGVMCME TEVEDDETET AEKNIPDRSF RKIVIENDLE HNSDSYVLPA  660
TPLQSVRQSV QLPFSSKNKP PRSSFLTIGG GSSSSFNGRQ GFVRPSFALP PPKFDENKNL  720
ETVIEDNEMP DFLSSPIGGI KSSSPNGKRV SPPHGGGAGA SLSPGLRSSR KLILQSIPSF  780
PSLSSNQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5fd3_A9e-1948660612120Protein lin-54 homolog
5fd3_B9e-1948660612120Protein lin-54 homolog
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1469474KKKRRR
2471475KRRRV
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00624PBMTransfer from PK22848.1Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.G00370.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012832412.10.0PREDICTED: protein tesmin/TSO1-like CXC 2
TrEMBLA0A022RNB60.0A0A022RNB6_ERYGU; Uncharacterized protein
STRINGMigut.G00370.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24672345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14770.11e-146TESMIN/TSO1-like CXC 2