PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.G00485.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

C2H2

Protein Properties

Length: 222aa MW: 24618.6 Da PI: 8.2451

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.G00485.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.5	0.00044	33	53	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C +C+++F ++ L++H +tH Migut.G00485.1.p 33 CRICDQVFFSNTRLVNHFQTH 53 *****************9999 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50157	9.411	31	58	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	33	53	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence Send to blast
MARSWSELSV DHKLVFLLEG LAREQDRTTP IACRICDQVF FSNTRLVNHF QTHFNKDRTF 60 NPASLLGRPV SQKNITKKFS SSSQYTHSSS VPMNVHNNTA EKSVEPLIAS EPIGSQNSRF 120 PIRPVVPPIH ASESRKLSNS QFPKAFGASA SQSIPGNRDL AFGTTNRGFP ETAPKNYVEG 180 SFTDYTKPYI MQLERSIEEV MGGGNDVNNP DETDIDLTLK L*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.G00485.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Link Out ? help Back to Top
Phytozome	Migut.G00485.1.p