PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.G00519.1.p
Common NameMIMGU_mgv1a021652mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 202aa    MW: 23555.2 Da    PI: 4.6705
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.G00519.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding551.9e-171964148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg++++eE+e +++++++lG++ W++Ia++++ gRt++++k+ w+++l
  Migut.G00519.1.p 19 RGNFSEEEEETIIELHRLLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 64
                      89********************.*********.************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.13E-20372IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.7E-9424IPR009057Homeodomain-like
PROSITE profilePS5129427.041468IPR017930Myb domain
SMARTSM007172.1E-151866IPR001005SANT/Myb domain
PfamPF002492.4E-161964IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.7E-232569IPR009057Homeodomain-like
CDDcd001671.88E-53364No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
MWEECRLRWT NYLKPDIKRG NFSEEEEETI IELHRLLGNR WSAIAARLPG RTDNEIKNVW  60
HTHLKKKIKN YQSSQNSKRQ TTISISKCDP KVLENCKLDK NNVTNNSRSP KQCSSEMSTV  120
TDSSVEKTNV KNEEIDYSSE YFPHIDESFW CEELSRDDAD CPSLVEFPAA ESMEDLKIDD  180
SMDFWYNLFI RAGDMPDLPE F*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A6e-1936843108B-MYB
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.G00519.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011091315.11e-103myb-related protein Myb4
TrEMBLA0A022PRD01e-143A0A022PRD0_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.16e-42myb domain protein 15