PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.G01139.1.p
Common NameLOC105972712, MIMGU_mgv1a006404mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 446aa    MW: 49090.9 Da    PI: 5.1927
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.G01139.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.55.6e-09278325455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       ah+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Migut.G01139.1.p 278 AHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 325
                       8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.14E-17272343IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.17E-11272329No hitNo description
Gene3DG3DSA:4.10.280.102.5E-17274342IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.542274324IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.7E-6278325IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.5E-10280330IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    Send to blast
MEKAESMFGN YSGEEDQQQQ QQQQQHEYIS FFNSNNNPTN WDNLTDQNDP FESALSSMVS  60
SPTASIPPNG ENIVLRELIG RLGSICNNNY NNSTNTSCYS TPLNSPPKLN LFAQHHHNNN  120
SFPTNMAPFS TDPAFAERAA RYSSRVSGSN PIDFKPELAD SRENSSVSDQ QIPINIIAGG  180
GGGGGGGAAV SRKRKSIPKG KGKETPPAPK PAAAAAAKDN ANNVGSENSE SSVKRSKSEE  240
EDDDNEKDGS KGKDNINTKE APKDYIHVRA RRGQATDAHS LAERVRREKI SERMKFLQDL  300
VPGCNKVTGK AVMLDEIINY VQSLQRQVEF LSMKLATVNP RMDINVEALM SSKDMFQSRN  360
VFPSDGYPFQ SQPNSHIMDI PSAADNVPFQ SSNNFNAAFA RNQTMQQLPP MDNFTETASQ  420
VSTFWEDDLH SVVQMEFTQN QSQFS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1190195SRKRKS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00660PBMTransfer from Pp3c6_9520Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.G01139.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP2574416e-76KP257441.1 Salvia miltiorrhiza clone 8 basic helix-loop-helix transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012853146.10.0PREDICTED: transcription factor bHLH78-like
TrEMBLA0A022QAJ00.0A0A022QAJ0_ERYGU; Uncharacterized protein
STRINGMigut.G01139.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10572383
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07340.17e-60bHLH family protein