PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.G01290.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family Nin-like
Protein Properties Length: 849aa    MW: 95200.2 Da    PI: 4.9808
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.G01290.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK91.94.6e-29472522252
            RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                       ek+isl +l++yFs+++kdAAk+Lgvc+T+LKriCR++GI RWP+Rki+++
  Migut.G01290.1.p 472 EKNISLRVLQQYFSGSLKDAAKNLGVCPTTLKRICRRHGIYRWPSRKINKV 522
                       79***********************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.359455542IPR003035RWP-RK domain
PfamPF020429.7E-26474522IPR003035RWP-RK domain
Gene3DG3DSA:3.10.20.2405.2E-21742826No hitNo description
SuperFamilySSF542771.29E-20743828No hitNo description
PROSITE profilePS5174520.626745829IPR000270PB1 domain
SMARTSM006668.9E-19745829IPR000270PB1 domain
PfamPF005644.7E-15746827IPR000270PB1 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 849 aa     Download sequence    Send to blast
MDSMVANLMD DYVRGSNYDD SFGNVLDLMN FESQDQMFSP YSLQSIEQYF MESQNDVENI  60
PRNILKVSLN EKMLRALHLF KELSGGGILA QLWVPMKNGD QYVLSTCEQP FLLDQTLSGY  120
REVSRMFTFA TEVGPGCFPG LPGRVFISKV PEWTSNVMYY SKAEYLRVQH AIDHEVRGSI  180
ALPVFEEDDS IDGDKSCCAV LEIVTTKEKL DFDLEIDNIS RALQSLSKNQ NAALAEITDV  240
LRAICHAHRL PLALTWIPCS YTEEYSGNQT IRTNSIKKII LNPNEKPVLC VEESACYSSD  300
TYMQGFIRAC GGHFLEQGQG VVGKALQSNQ PFFYHDVKEY HISEYPLVHH ARKYGLNAAV  360
AIRLRSTFTG EDDYILEFFL PVNIGGGAEQ QLLLDNLSST LQRISRSLRT VSDEELFGKR  420
GFEESMVVND DLLVLKTAEI DDNTLHEKVD RVSFQKMGGS SRQMEKKKSA YEKNISLRVL  480
QQYFSGSLKD AAKNLGVCPT TLKRICRRHG IYRWPSRKIN KVNRSLKKIQ SVLESVEGAE  540
GGLKFDATTG KLVSAGSIMQ EFDPSTQFYF NTKTDYWTKN LDAPIANATS LSSTSCIDYE  600
EYLFDVKNCD ESKLAALDTR GPSWPPSLKT IPWTTSPNAP KNSFLLREYN GLELRDVNNI  660
KAETSGSYLF SDCSSSKISI DDPVRFGGST MIDVNDGFIE QSQISSSRMT NSSKQMNSSS  720
SSSRSFDEKS PLKTEASYEG DSGAKITVKA TYGGDMVRFK FEPSSSSGCC ELYEEVAKRF  780
KIETGQFKLN YLDDEEEWVM MVNDSDLREC LEVLEFVGTR TVKFLVRTDV DGPTRNSGTG  840
NHFLAGST*
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.G01290.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012833048.10.0PREDICTED: protein NLP8-like
SwissprotQ9M1B00.0NLP9_ARATH; Protein NLP9
TrEMBLA0A022RKU80.0A0A022RKU8_ERYGU; Uncharacterized protein
TrEMBLA0A2G9GDZ00.0A0A2G9GDZ0_9LAMI; Uncharacterized protein
STRINGMigut.G01290.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA39812445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59580.20.0Nin-like family protein