PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H00280.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 188aa    MW: 21033.8 Da    PI: 4.1312
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H00280.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.74.7e-071232447
                      HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqky 47
                      W++Ia +++ gRt++++k++w ++
  Migut.H00280.1.p  1 WTLIAGRVP-GRTANDIKNFWKTH 23
                      9********.***********987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd001674.18E-5124No hitNo description
SuperFamilySSF466896.52E-5127IPR009057Homeodomain-like
PROSITE profilePS5129414.945128IPR017930Myb domain
Gene3DG3DSA:1.10.10.606.5E-8123IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
WTLIAGRVPG RTANDIKNFW KTHFEKQSAT AAAAIAGGES SAGIKTTTQS CNIFKPIPRT  60
LSKLFQQVPE YCPVNVDDNN NNNNNNNNNN NNNNNNNNNN NLKNKEPFLP VIQEEEEDDE  120
KADECIRWWG NLLEIAEENG QGANSSLFTD EYPPVTDEPT TMFSPGNNYV NQDLFSNLSL  180
DLHDWEL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H00280.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJF6949941e-115JF694994.1 Mimulus cupreus cell-line inbred line Mcu042 MYB1-like protein 2 mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012855759.11e-134PREDICTED: myb-like protein AA, partial
TrEMBLF5CI402e-85F5CI40_9LAMI; MYB1-like protein 2 (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1982322
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66390.15e-11myb domain protein 90