PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H00514.1.p
Common NameLOC105972280, MIMGU_mgv1a001716mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family TALE
Protein Properties Length: 770aa    MW: 83428.6 Da    PI: 7.4685
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H00514.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.42.7e-095756121954
                       HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
          Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                       Fe   ++yps +++  LA+++gL+ +qV++WF N R +
  Migut.H00514.1.p 575 FEHflHPYPSDADKHLLARQTGLSRNQVSNWFINARVR 612
                       664459******************************88 PP
2BELL121.83e-39437507272
              BELL   2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                       r e+q++k+kLls+l+eVd+rY++y+eq+q+v++sF++v+g g+a pYt lA+ka+SrhFrcLkdaia q+
  Migut.H00514.1.p 437 RLEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDMVMGFGAAVPYTCLAQKAMSRHFRCLKDAIAAQL 507
                       779*****************************************************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005746.2E-72357505IPR006563POX domain
PfamPF075261.9E-51362504IPR006563POX domain
PROSITE profilePS5007112.568553616IPR001356Homeobox domain
CDDcd000865.13E-13556617No hitNo description
SMARTSM003891.2E-9556620IPR001356Homeobox domain
SuperFamilySSF466892.44E-17558623IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.609.3E-29559622IPR009057Homeodomain-like
PfamPF059203.9E-18573612IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009965Biological Processleaf morphogenesis
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 770 aa     Download sequence    Send to blast
MGIATPPPPT VASHRKVHNS VQFSDENKSP SIFSMSEDYH HQGSIFSFSN GFERSQQEQQ  60
HHNQQQQQQQ HIAQQIRRDK LRVQGFDPPP PLVGIEEEET GGIPVYEPAG MLSEMFGFPS  120
GGASTATELL ENQILQSYRN PRAGPPPSAA DWFSHHRQGM VVGGGSGGDL GVSKHHHHHQ  180
QQQQQQHQIS GINADSAAAM QLFLMNPPQQ QQRQRSPSPS TSHQNPPHES TSSTLHMLLP  240
NPSSSSSTLH HALHNAPPGG AFGQFTWLQN SGNESSNPSE INPGVVEGQG LSLSLSSSLQ  300
HLEAAKAEEL RMGEGGMLFF GQGGGGSTPA TQYQFKNSGG GGIGHSHQLH VGMGSSFGSV  360
NMLRSSKYAK AAQELLEEFC SVGRGHFKKS KFRKGQNNNN GSNPSAGGAA TSGAAAAGGG  420
NSSSSSKDIP PLSAGDRLEH QRRKVKLLSM LDEVDRRYNH YCEQMQMVVN SFDMVMGFGA  480
AVPYTCLAQK AMSRHFRCLK DAIAAQLKNS CELLGEKDAG TSGVTKGETP RLRMLEQSLR  540
QQRAFHQMGM MEQEAWRPQR GLPERSVNIL RAWLFEHFLH PYPSDADKHL LARQTGLSRN  600
QVSNWFINAR VRLWKPMVEE MYQQEAKDDS AASNDQNSSG SAQTPTPPST AAITPPPPPP  660
PPPPPPTMIR SEINNNAHLE NDPSYIAINT RQVFSENQPP TTSLPSAAAS STAVHPFPAA  720
MHDDQSSIGA TTFIRFGANA GDVSLTLGLR HAGNMPEKNP FSVRDFGGC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A3e-16562620563Homeobox protein Meis2
3k2a_B3e-16562620563Homeobox protein Meis2
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that establishes leaf shape by repressing growth in specific subdomains of the leaf. Negatively regulates knox homeobox gene KNAT1/BP expression.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H00514.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1825700.0AC182570.2 Erythranthe guttata clone MGBa-64L10, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012852672.10.0PREDICTED: BEL1-like homeodomain protein 4
SwissprotQ9SW801e-180BLH2_ARATH; BEL1-like homeodomain protein 2
TrEMBLA0A022RUY30.0A0A022RUY3_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33412139
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36870.21e-140BEL1-like homeodomain 2
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]