PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H00727.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 555aa    MW: 61547 Da    PI: 4.694
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H00727.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM156.11.5e-4861331128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                       lppGfrFhPtd el+++yLk+kv gkkl + e+i+ev+iyk+ PwdLp k ++k+++ ew+fF++r+kkya+g r +rat++gyWk+tgkd++
  Migut.H00727.1.p   6 LPPGFRFHPTDVELIMYYLKRKVMGKKLLF-EAIAEVNIYKFSPWDLPdKsCLKNKDLEWFFFCPREKKYASGVRVKRATENGYWKTTGKDRP 97 
                       79*************************888.89**************96347777888*********************************** PP

               NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       + + ++++vg  ktLvf+ g+apkge+tdWv+hey++
  Migut.H00727.1.p  98 ISH-NDRKVGSVKTLVFHLGTAPKGERTDWVIHEYKI 133
                       **9.9999***************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.32E-573155IPR003441NAC domain
PROSITE profilePS5100554.5076155IPR003441NAC domain
PfamPF023651.4E-247133IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 555 aa     Download sequence    Send to blast
MARTSLPPGF RFHPTDVELI MYYLKRKVMG KKLLFEAIAE VNIYKFSPWD LPDKSCLKNK  60
DLEWFFFCPR EKKYASGVRV KRATENGYWK TTGKDRPISH NDRKVGSVKT LVFHLGTAPK  120
GERTDWVIHE YKIVDAQLAA AGVQDTFVLC KVFKKNGPGP KNGAQYGAPF DEAEWADVED  180
DTPNQAMSLA SDGPSSLFTP GSTSALLVEG GPSPSAVHPT PTSEVLVDET DDEIVRLLES  240
FTEDDALLSN ENGINQDDLT EKGKNKRLAS WDANDIYNGL DDLNSWNSWA QMYQGTLDFS  300
GMQRDGYLLN NILPQDNSAY IELNDFLAPL NYPHKVPRTD QSPLGDIFGS HSYDNGQQFR  360
PGPSFASTNQ YSSGPNQLPM MPEGFQPGNN CLDGFQMADN QFYQGSNVAY DMDFAFGQPG  420
NNGFNSNNQD SERGIPKKTE SNPARSTPSA VYCSCSCTSG GSSIHIKAEV THGAGECTNE  480
ALSVMMGGSS SCWCILPFFL FKHELLLLLL FILVRNYLLL FVVFFYYCYL NDALFVFLNT  540
YCDCSIEIAS APSS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-46215511168Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H00727.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012853699.10.0PREDICTED: NAC domain-containing protein 68-like isoform X1
TrEMBLA0A022Q9390.0A0A022Q939_ERYGU; Uncharacterized protein
STRINGMigut.H00727.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA60502334
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09330.42e-91NAC domain containing protein 82