PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H00738.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 254aa    MW: 28508.8 Da    PI: 6.5074
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H00738.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.89e-09141183754
                       HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       ++ r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  Migut.H00738.1.p 141 IAARHRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIRYVKFL 183
                       56799*****************87.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.091134183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.89E-15139201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.15E-11140188No hitNo description
SMARTSM003533.0E-13140189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.5E-13141197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.7E-6142183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010500Biological Processtransmitting tissue development
GO:0048462Biological Processcarpel formation
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MDISQQHKFT NTNWPEQPYC SMVAADEHHH ILHQNPFDHT QQIWPYNNNN NYLQILQHQQ  60
NHQEPPPPDH SSDTQALLPS PGLLTGGGGD QGEEDEAEEE LGAMKEMMFK IAAMQPVDID  120
PATIRRPRRR NVRISEDPQS IAARHRRERI SEKIRILQRL VPGGTKMDTA SMLDEAIRYV  180
KFLKRQIRTL QTNHHQHQPP PPCVGIPTAS ASADDWVMAA TTKAAAAAGT SSYLFGGTHD  240
DDGLCFNRKF IGD*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1124129RRPRRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H00738.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012853653.10.0PREDICTED: transcription factor HEC3-like
TrEMBLA0A022Q9551e-142A0A022Q955_ERYGU; Uncharacterized protein
STRINGMigut.H00738.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA75223101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00120.11e-36bHLH family protein