PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H00770.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 211aa    MW: 23751.3 Da    PI: 8.4772
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H00770.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.11.2e-112678155
                      CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                      ++ ah  +Er+RR+++   ++ Lr+llP       ++K   ++   +Av YIk++q
  Migut.H00770.1.p 26 KKSAHRDIERQRRQEMSLLYSSLRSLLPLqY---VKGKRAVSDHMHQAVIYIKHMQ 78
                      689**************************66...99*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.23E-112492IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.7672577IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.4E-92678IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.2E-102696IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MLANYATEVN TTAAVVLKEN NNVESKKSAH RDIERQRRQE MSLLYSSLRS LLPLQYVKGK  60
RAVSDHMHQA VIYIKHMQMK NEEMRIKIEK LNKLTNNVSE TRSILEDRVI IEAAANSSPT  120
YCVKINVCNG GGINEILITS SSSIDNGSFS LSKVFVKLLQ RGFNVISCVS TRVDNLFLHK  180
IQIDEVIGTG QFDETCLILF ICQDINNQEK *
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H00770.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012857558.11e-134PREDICTED: transcription factor bHLH125-like
TrEMBLA0A022PYI21e-103A0A022PYI2_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.H00770.1.p1e-153(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA59824109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.14e-20bHLH family protein